Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SLC1A1P43005 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
SLC1A1P43005 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SLC1A1P43005 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SLC1A1P43005 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
SLC1A1P43005 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC21.7■■□□□ 1.06
SLC1A1P43005 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.7■■□□□ 1.06
SLC1A1P43005 BID-203ENST00000399765 1879 ntTSL 2 BASIC21.7■■□□□ 1.06
SLC1A1P43005 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC21.7■■□□□ 1.06
SLC1A1P43005 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC21.7■■□□□ 1.06
SLC1A1P43005 AC092667.1-201ENST00000434301 2586 ntBASIC21.7■■□□□ 1.06
SLC1A1P43005 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
SLC1A1P43005 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SLC1A1P43005 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
SLC1A1P43005 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.69■■□□□ 1.06
SLC1A1P43005 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SLC1A1P43005 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SLC1A1P43005 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC21.69■■□□□ 1.06
SLC1A1P43005 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC21.69■■□□□ 1.06
SLC1A1P43005 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SLC1A1P43005 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
SLC1A1P43005 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SLC1A1P43005 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC21.69■■□□□ 1.06
SLC1A1P43005 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SLC1A1P43005 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SLC1A1P43005 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC21.69■■□□□ 1.06
SLC1A1P43005 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC21.69■■□□□ 1.06
SLC1A1P43005 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC21.69■■□□□ 1.06
SLC1A1P43005 LINC02228-203ENST00000641970 1355 ntBASIC21.69■■□□□ 1.06
SLC1A1P43005 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.69■■□□□ 1.06
SLC1A1P43005 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SLC1A1P43005 AC027702.1-201ENST00000563810 1770 ntBASIC21.69■■□□□ 1.06
SLC1A1P43005 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC21.68■■□□□ 1.06
SLC1A1P43005 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SLC1A1P43005 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SLC1A1P43005 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC21.68■■□□□ 1.06
SLC1A1P43005 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC21.68■■□□□ 1.06
SLC1A1P43005 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC21.68■■□□□ 1.06
SLC1A1P43005 AC120498.10-201ENST00000621827 505 ntBASIC21.68■■□□□ 1.06
SLC1A1P43005 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SLC1A1P43005 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SLC1A1P43005 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC21.68■■□□□ 1.06
SLC1A1P43005 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SLC1A1P43005 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
SLC1A1P43005 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SLC1A1P43005 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC21.68■■□□□ 1.06
SLC1A1P43005 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SLC1A1P43005 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SLC1A1P43005 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
SLC1A1P43005 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SLC1A1P43005 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SLC1A1P43005 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
SLC1A1P43005 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SLC1A1P43005 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SLC1A1P43005 AK1-201ENST00000223836 736 ntTSL 3 BASIC21.67■■□□□ 1.06
SLC1A1P43005 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC21.67■■□□□ 1.06
SLC1A1P43005 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC21.67■■□□□ 1.06
SLC1A1P43005 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.67■■□□□ 1.06
SLC1A1P43005 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
SLC1A1P43005 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SLC1A1P43005 AC020907.5-201ENST00000624372 1936 ntBASIC21.67■■□□□ 1.06
SLC1A1P43005 FP700111.2-201ENST00000619190 1892 ntBASIC21.66■■□□□ 1.06
SLC1A1P43005 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
SLC1A1P43005 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC21.66■■□□□ 1.06
SLC1A1P43005 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SLC1A1P43005 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC21.66■■□□□ 1.06
SLC1A1P43005 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SLC1A1P43005 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SLC1A1P43005 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC21.66■■□□□ 1.06
SLC1A1P43005 AC010141.2-201ENST00000452426 721 ntBASIC21.66■■□□□ 1.06
SLC1A1P43005 RARRES2P11-201ENST00000635158 484 ntBASIC21.66■■□□□ 1.06
SLC1A1P43005 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
SLC1A1P43005 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SLC1A1P43005 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
SLC1A1P43005 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
SLC1A1P43005 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
SLC1A1P43005 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SLC1A1P43005 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
SLC1A1P43005 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC21.66■■□□□ 1.06
SLC1A1P43005 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SLC1A1P43005 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SLC1A1P43005 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC21.65■■□□□ 1.06
SLC1A1P43005 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
SLC1A1P43005 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SLC1A1P43005 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC21.65■■□□□ 1.06
SLC1A1P43005 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC21.65■■□□□ 1.06
SLC1A1P43005 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
SLC1A1P43005 AC245052.3-201ENST00000450182 901 ntBASIC21.65■■□□□ 1.06
SLC1A1P43005 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC21.65■■□□□ 1.06
SLC1A1P43005 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SLC1A1P43005 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SLC1A1P43005 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC21.65■■□□□ 1.06
SLC1A1P43005 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
SLC1A1P43005 STAC-204ENST00000457375 1366 ntTSL 2 BASIC21.64■■□□□ 1.06
SLC1A1P43005 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC21.64■■□□□ 1.05
SLC1A1P43005 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
SLC1A1P43005 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC21.64■■□□□ 1.05
SLC1A1P43005 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
SLC1A1P43005 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SLC1A1P43005 AC123595.1-201ENST00000440769 1046 ntBASIC21.64■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms