Protein–RNA interactions for Protein: P40968

CDC40, Pre-mRNA-processing factor 17, yeastyeast

Predicted RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC40P40968 GPI17YDR434W 1605 nt2.28□□□□□ -2.04
CDC40P40968 KRE33YNL132W 3171 nt2.28□□□□□ -2.04
CDC40P40968 OPI6YDL096C 327 nt2.28□□□□□ -2.04
CDC40P40968 MIC19YFR011C 513 nt2.28□□□□□ -2.04
CDC40P40968 YFR057WYFR057W 456 nt2.28□□□□□ -2.04
CDC40P40968 MST27YGL051W 705 nt2.28□□□□□ -2.04
CDC40P40968 ERG25YGR060W 930 nt2.28□□□□□ -2.04
CDC40P40968 CKA1YIL035C 1119 nt2.28□□□□□ -2.04
CDC40P40968 YIL174WYIL174W 228 nt2.28□□□□□ -2.04
CDC40P40968 YJL156W-AYJL156W-A 222 nt2.28□□□□□ -2.04
CDC40P40968 YJL222W-AYJL222W-A 228 nt2.28□□□□□ -2.04
CDC40P40968 YBL068W-AYBL068W-A 237 nt2.28□□□□□ -2.04
CDC40P40968 PEP12YOR036W 867 nt2.28□□□□□ -2.04
CDC40P40968 YBR085C-AYBR085C-A 258 nt2.28□□□□□ -2.04
CDC40P40968 MBA1YBR185C 837 nt2.28□□□□□ -2.04
CDC40P40968 PBS2YJL128C 2007 nt2.28□□□□□ -2.04
CDC40P40968 YLR001CYLR001C 2589 nt2.28□□□□□ -2.04
CDC40P40968 SRO77YBL106C 3033 nt2.28□□□□□ -2.05
CDC40P40968 RAD18YCR066W 1464 nt2.27□□□□□ -2.05
CDC40P40968 KEL2YGR238C 2649 nt2.27□□□□□ -2.05
CDC40P40968 CSF1YLR087C 8877 nt2.27□□□□□ -2.05
CDC40P40968 YER119C-AYER119C-A 372 nt2.27□□□□□ -2.05
CDC40P40968 VMA7YGR020C 357 nt2.27□□□□□ -2.05
CDC40P40968 PCL5YHR071W 690 nt2.27□□□□□ -2.05
CDC40P40968 VPH2YKL119C 648 nt2.27□□□□□ -2.05
CDC40P40968 RGM1YMR182C 636 nt2.27□□□□□ -2.05
CDC40P40968 YOL106WYOL106W 354 nt2.27□□□□□ -2.05
CDC40P40968 YBR062CYBR062C 543 nt2.27□□□□□ -2.05
CDC40P40968 MES1YGR264C 2256 nt2.26□□□□□ -2.05
CDC40P40968 YJL132WYJL132W 2253 nt2.26□□□□□ -2.05
CDC40P40968 STI1YOR027W 1770 nt2.26□□□□□ -2.05
CDC40P40968 YEA4YEL004W 1029 nt2.26□□□□□ -2.05
CDC40P40968 GEP7YGL057C 864 nt2.26□□□□□ -2.05
CDC40P40968 THG1YGR024C 714 nt2.26□□□□□ -2.05
CDC40P40968 YHL005CYHL005C 393 nt2.26□□□□□ -2.05
CDC40P40968 YJL202CYJL202C 348 nt2.26□□□□□ -2.05
CDC40P40968 YPT52YKR014C 705 nt2.26□□□□□ -2.05
CDC40P40968 SPC2YML055W 537 nt2.26□□□□□ -2.05
CDC40P40968 TRZ1YKR079C 2517 nt2.26□□□□□ -2.05
CDC40P40968 SCY1YGL083W 2415 nt2.26□□□□□ -2.05
CDC40P40968 SAG1YJR004C 1953 nt2.25□□□□□ -2.05
CDC40P40968 RPL14BYHL001W 417 nt2.25□□□□□ -2.05
CDC40P40968 ATG27YJL178C 816 nt2.25□□□□□ -2.05
CDC40P40968 YJR020WYJR020W 333 nt2.25□□□□□ -2.05
CDC40P40968 PET191YJR034W 327 nt2.25□□□□□ -2.05
CDC40P40968 SMD2YLR275W 333 nt2.25□□□□□ -2.05
CDC40P40968 ATG3YNR007C 933 nt2.25□□□□□ -2.05
CDC40P40968 YPR145C-AYPR145C-A 237 nt2.25□□□□□ -2.05
CDC40P40968 ARL1YBR164C 552 nt2.25□□□□□ -2.05
CDC40P40968 MRD1YPR112C 2664 nt2.25□□□□□ -2.05
CDC40P40968 GYP7YDL234C 2241 nt2.25□□□□□ -2.05
CDC40P40968 ROY1YMR258C 1662 nt2.25□□□□□ -2.05
CDC40P40968 LST4YKL176C 2487 nt2.24□□□□□ -2.05
CDC40P40968 TIF35YDR429C 825 nt2.24□□□□□ -2.05
CDC40P40968 TIM9YEL020W-A 264 nt2.24□□□□□ -2.05
CDC40P40968 EST3YIL009C-A 546 nt2.24□□□□□ -2.05
CDC40P40968 RNR2YJL026W 1200 nt2.24□□□□□ -2.05
CDC40P40968 YMR194C-AYMR194C-A 225 nt2.24□□□□□ -2.05
CDC40P40968 CBP6YBR120C 489 nt2.24□□□□□ -2.05
CDC40P40968 ESL2YKR096W 3588 nt2.24□□□□□ -2.05
CDC40P40968 YIL080WYIL080W 4722 nt2.24□□□□□ -2.05
CDC40P40968 RGC1YPR115W 3252 nt2.24□□□□□ -2.05
CDC40P40968 BNI1YNL271C 5862 nt2.24□□□□□ -2.05
CDC40P40968 ESC2YDR363W 1371 nt2.23□□□□□ -2.05
CDC40P40968 YRR1YOR162C 2433 nt2.23□□□□□ -2.05
CDC40P40968 NPR3YHL023C 3441 nt2.23□□□□□ -2.05
CDC40P40968 HSC82YMR186W 2118 nt2.23□□□□□ -2.05
CDC40P40968 RAV1YJR033C 4074 nt2.23□□□□□ -2.05
CDC40P40968 NSE4YDL105W 1209 nt2.23□□□□□ -2.05
CDC40P40968 ADK1YDR226W 669 nt2.23□□□□□ -2.05
CDC40P40968 tF(GAA)DtF(GAA)D 73 nt2.23□□□□□ -2.05
CDC40P40968 tF(GAA)NtF(GAA)N 73 nt2.23□□□□□ -2.05
CDC40P40968 GLC7YER133W 939 nt2.23□□□□□ -2.05
CDC40P40968 CWC23YGL128C 852 nt2.23□□□□□ -2.05
CDC40P40968 YGR053CYGR053C 852 nt2.23□□□□□ -2.05
CDC40P40968 TWF1YGR080W 999 nt2.23□□□□□ -2.05
CDC40P40968 PPX1YHR201C 1194 nt2.23□□□□□ -2.05
CDC40P40968 SUI2YJR007W 915 nt2.23□□□□□ -2.05
CDC40P40968 RNP1YLL046C 750 nt2.23□□□□□ -2.05
CDC40P40968 APC9YLR102C 798 nt2.23□□□□□ -2.05
CDC40P40968 RPL19BYBL027W 570 nt2.23□□□□□ -2.05
CDC40P40968 PAI3YMR174C 207 nt2.23□□□□□ -2.05
CDC40P40968 YNL046WYNL046W 519 nt2.23□□□□□ -2.05
CDC40P40968 CIN2YPL241C 807 nt2.23□□□□□ -2.05
CDC40P40968 AXL1YPR122W 3627 nt2.23□□□□□ -2.05
CDC40P40968 SIR3YLR442C 2937 nt2.23□□□□□ -2.05
CDC40P40968 RRP12YPL012W 3687 nt2.23□□□□□ -2.05
CDC40P40968 HRD3YLR207W 2502 nt2.23□□□□□ -2.05
CDC40P40968 YKR078WYKR078W 1758 nt2.23□□□□□ -2.05
CDC40P40968 UBP16YPL072W 1500 nt2.22□□□□□ -2.05
CDC40P40968 PHO91YNR013C 2685 nt2.22□□□□□ -2.05
CDC40P40968 DAL5YJR152W 1632 nt2.22□□□□□ -2.05
CDC40P40968 YER079C-AYER079C-A 339 nt2.22□□□□□ -2.05
CDC40P40968 YGL230CYGL230C 444 nt2.22□□□□□ -2.05
CDC40P40968 HAT1YPL001W 1125 nt2.22□□□□□ -2.05
CDC40P40968 CTF13YMR094W 1437 nt2.22□□□□□ -2.05
CDC40P40968 MFB1YDR219C 1398 nt2.22□□□□□ -2.05
CDC40P40968 INP51YIL002C 2841 nt2.22□□□□□ -2.05
CDC40P40968 YIL166CYIL166C 1629 nt2.21□□□□□ -2.06
CDC40P40968 YDL157CYDL157C 357 nt2.21□□□□□ -2.06
Retrieved 100 of 7,029 protein–RNA pairs in 44.2 ms