Protein–RNA interactions for Protein: P39111

VMA7, V-type proton ATPase subunit F, yeastyeast

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VMA7P39111 IRA1YBR140C 9279 nt1.48□□□□□ -2.17
VMA7P39111 MFB1YDR219C 1398 nt1.48□□□□□ -2.17
VMA7P39111 tC(GCA)BtC(GCA)B 72 nt1.48□□□□□ -2.17
VMA7P39111 tC(GCA)GtC(GCA)G 72 nt1.48□□□□□ -2.17
VMA7P39111 tC(GCA)P1tC(GCA)P1 72 nt1.48□□□□□ -2.17
VMA7P39111 tC(GCA)P2tC(GCA)P2 72 nt1.48□□□□□ -2.17
VMA7P39111 YGL218WYGL218W 651 nt1.48□□□□□ -2.17
VMA7P39111 YJR020WYJR020W 333 nt1.48□□□□□ -2.17
VMA7P39111 YLR379WYLR379W 375 nt1.48□□□□□ -2.17
VMA7P39111 YAP7YOL028C 738 nt1.48□□□□□ -2.17
VMA7P39111 UBP16YPL072W 1500 nt1.48□□□□□ -2.17
VMA7P39111 TRL1YJL087C 2484 nt1.48□□□□□ -2.17
VMA7P39111 HCS1YKL017C 2052 nt1.47□□□□□ -2.17
VMA7P39111 YEL1YBL060W 2064 nt1.47□□□□□ -2.17
VMA7P39111 STD1YOR047C 1335 nt1.47□□□□□ -2.17
VMA7P39111 ECM11YDR446W 909 nt1.47□□□□□ -2.17
VMA7P39111 YAL034C-BYAL034C-B 354 nt1.47□□□□□ -2.17
VMA7P39111 NNF1YJR112W 606 nt1.47□□□□□ -2.17
VMA7P39111 NYV1YLR093C 762 nt1.47□□□□□ -2.17
VMA7P39111 YBR013CYBR013C 390 nt1.47□□□□□ -2.17
VMA7P39111 YOR392WYOR392W 444 nt1.47□□□□□ -2.17
VMA7P39111 YSA1YBR111C 696 nt1.47□□□□□ -2.17
VMA7P39111 CTP1YBR291C 900 nt1.47□□□□□ -2.17
VMA7P39111 FYV8YGR196C 2454 nt1.46□□□□□ -2.18
VMA7P39111 SPC110YDR356W 2835 nt1.46□□□□□ -2.18
VMA7P39111 TCA17YEL048C 459 nt1.46□□□□□ -2.18
VMA7P39111 YER068C-AYER068C-A 432 nt1.46□□□□□ -2.18
VMA7P39111 VTC1YER072W 390 nt1.46□□□□□ -2.18
VMA7P39111 tQ(UUG)E2tQ(UUG)E2 72 nt1.46□□□□□ -2.18
VMA7P39111 YMR181CYMR181C 465 nt1.46□□□□□ -2.18
VMA7P39111 MRPS17YMR188C 714 nt1.46□□□□□ -2.18
VMA7P39111 YMR272W-BYMR272W-B 108 nt1.46□□□□□ -2.18
VMA7P39111 YNL234WYNL234W 1281 nt1.46□□□□□ -2.18
VMA7P39111 YOR203WYOR203W 354 nt1.46□□□□□ -2.18
VMA7P39111 MSH6YDR097C 3729 nt1.46□□□□□ -2.18
VMA7P39111 SYO1YDL063C 1863 nt1.46□□□□□ -2.18
VMA7P39111 CCH1YGR217W 6120 nt1.46□□□□□ -2.18
VMA7P39111 VPS41YDR080W 2979 nt1.45□□□□□ -2.18
VMA7P39111 FMN1YDR236C 657 nt1.45□□□□□ -2.18
VMA7P39111 MPS2YGL075C 1164 nt1.45□□□□□ -2.18
VMA7P39111 RPL11BYGR085C 525 nt1.45□□□□□ -2.18
VMA7P39111 ASG7YJL170C 630 nt1.45□□□□□ -2.18
VMA7P39111 YKR075W-AYKR075W-A 270 nt1.45□□□□□ -2.18
VMA7P39111 RPL11AYPR102C 525 nt1.45□□□□□ -2.18
VMA7P39111 VPS16YPL045W 2397 nt1.45□□□□□ -2.18
VMA7P39111 TDA9YML081W 3756 nt1.45□□□□□ -2.18
VMA7P39111 ARK1YNL020C 1917 nt1.44□□□□□ -2.18
VMA7P39111 RRP1YDR087C 837 nt1.44□□□□□ -2.18
VMA7P39111 YDR320W-BYDR320W-B 138 nt1.44□□□□□ -2.18
VMA7P39111 YMR31YFR049W 372 nt1.44□□□□□ -2.18
VMA7P39111 YGL101WYGL101W 648 nt1.44□□□□□ -2.18
VMA7P39111 RGI2YIL057C 495 nt1.44□□□□□ -2.18
VMA7P39111 HSL1YKL101W 4557 nt1.44□□□□□ -2.18
VMA7P39111 POL5YEL055C 3069 nt1.43□□□□□ -2.18
VMA7P39111 VAC8YEL013W 1737 nt1.43□□□□□ -2.18
VMA7P39111 SPT15YER148W 723 nt1.43□□□□□ -2.18
VMA7P39111 YFR010W-AYFR010W-A 189 nt1.43□□□□□ -2.18
VMA7P39111 BRP1YGL007W 378 nt1.43□□□□□ -2.18
VMA7P39111 PGD1YGL025C 1194 nt1.43□□□□□ -2.18
VMA7P39111 MRPL24YMR193W 777 nt1.43□□□□□ -2.18
VMA7P39111 YBR277CYBR277C 402 nt1.43□□□□□ -2.18
VMA7P39111 FAB1YFR019W 6837 nt1.43□□□□□ -2.18
VMA7P39111 RRP6YOR001W 2202 nt1.43□□□□□ -2.18
VMA7P39111 GAL80YML051W 1308 nt1.42□□□□□ -2.18
VMA7P39111 BUB1YGR188C 3066 nt1.42□□□□□ -2.18
VMA7P39111 FUS1YCL027W 1539 nt1.42□□□□□ -2.18
VMA7P39111 ATP17YDR377W 306 nt1.42□□□□□ -2.18
VMA7P39111 ARI1YGL157W 1044 nt1.42□□□□□ -2.18
VMA7P39111 DSE2YHR143W 978 nt1.42□□□□□ -2.18
VMA7P39111 YIL156W-AYIL156W-A 402 nt1.42□□□□□ -2.18
VMA7P39111 NCE101YJL205C 162 nt1.42□□□□□ -2.18
VMA7P39111 RPL36BYPL249C-A 303 nt1.42□□□□□ -2.18
VMA7P39111 GRX1YCL035C 333 nt1.42□□□□□ -2.18
VMA7P39111 SHR3YDL212W 633 nt1.41□□□□□ -2.18
VMA7P39111 COBQ0105 1158 nt1.41□□□□□ -2.18
VMA7P39111 ADH4YGL256W 1149 nt1.41□□□□□ -2.18
VMA7P39111 RPA12YJR063W 378 nt1.41□□□□□ -2.18
VMA7P39111 YPR014CYPR014C 330 nt1.41□□□□□ -2.18
VMA7P39111 ATG11YPR049C 3537 nt1.41□□□□□ -2.18
VMA7P39111 GYP5YPL249C 2685 nt1.41□□□□□ -2.18
VMA7P39111 YGR109W-BYGR109W-B 4644 nt1.41□□□□□ -2.18
VMA7P39111 MET18YIL128W 3099 nt1.41□□□□□ -2.18
VMA7P39111 PIK1YNL267W 3201 nt1.4□□□□□ -2.18
VMA7P39111 SOK2YMR016C 2358 nt1.4□□□□□ -2.19
VMA7P39111 MUB1YMR100W 1863 nt1.4□□□□□ -2.19
VMA7P39111 YDL186WYDL186W 834 nt1.4□□□□□ -2.19
VMA7P39111 UBC5YDR059C 447 nt1.4□□□□□ -2.19
VMA7P39111 UPF3YGR072W 1164 nt1.4□□□□□ -2.19
VMA7P39111 YGR109W-AYGR109W-A 873 nt1.4□□□□□ -2.19
VMA7P39111 SPO16YHR153C 597 nt1.4□□□□□ -2.19
VMA7P39111 YJL133C-AYJL133C-A 225 nt1.4□□□□□ -2.19
VMA7P39111 ATP7YKL016C 525 nt1.4□□□□□ -2.19
VMA7P39111 YLR050CYLR050C 486 nt1.4□□□□□ -2.19
VMA7P39111 YLR257WYLR257W 966 nt1.4□□□□□ -2.19
VMA7P39111 SEN15YMR059W 387 nt1.4□□□□□ -2.19
VMA7P39111 YMR230W-AYMR230W-A 189 nt1.4□□□□□ -2.19
VMA7P39111 snR191snR191 274 nt1.4□□□□□ -2.19
VMA7P39111 HOP1YIL072W 1818 nt1.4□□□□□ -2.19
VMA7P39111 SRP1YNL189W 1629 nt1.4□□□□□ -2.19
VMA7P39111 BRR2YER172C 6492 nt1.4□□□□□ -2.19
Retrieved 100 of 7,029 protein–RNA pairs in 47.7 ms