Protein–RNA interactions for Protein: P38902

RPB11, DNA-directed RNA polymerase II subunit RPB11, yeastyeast

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPB11P38902 NPR3YHL023C 3441 nt1.39□□□□□ -2.19
RPB11P38902 MFB1YDR219C 1398 nt1.39□□□□□ -2.19
RPB11P38902 FMN1YDR236C 657 nt1.39□□□□□ -2.19
RPB11P38902 ECM11YDR446W 909 nt1.39□□□□□ -2.19
RPB11P38902 ADH4YGL256W 1149 nt1.39□□□□□ -2.19
RPB11P38902 LSM2YBL026W 288 nt1.39□□□□□ -2.19
RPB11P38902 YMR181CYMR181C 465 nt1.39□□□□□ -2.19
RPB11P38902 YOR392WYOR392W 444 nt1.39□□□□□ -2.19
RPB11P38902 SLM1YIL105C 2061 nt1.39□□□□□ -2.19
RPB11P38902 ARK1YNL020C 1917 nt1.38□□□□□ -2.19
RPB11P38902 TCA17YEL048C 459 nt1.38□□□□□ -2.19
RPB11P38902 ERG28YER044C 447 nt1.38□□□□□ -2.19
RPB11P38902 PEA2YER149C 1263 nt1.38□□□□□ -2.19
RPB11P38902 YLR257WYLR257W 966 nt1.38□□□□□ -2.19
RPB11P38902 CCW14YLR390W-A 717 nt1.38□□□□□ -2.19
RPB11P38902 YML090WYML090W 387 nt1.38□□□□□ -2.19
RPB11P38902 YOR203WYOR203W 354 nt1.38□□□□□ -2.19
RPB11P38902 RKM1YPL208W 1752 nt1.38□□□□□ -2.19
RPB11P38902 BUB1YGR188C 3066 nt1.38□□□□□ -2.19
RPB11P38902 CHC1YGL206C 4962 nt1.37□□□□□ -2.19
RPB11P38902 YDR320W-BYDR320W-B 138 nt1.37□□□□□ -2.19
RPB11P38902 NNF1YJR112W 606 nt1.37□□□□□ -2.19
RPB11P38902 YKR075W-AYKR075W-A 270 nt1.37□□□□□ -2.19
RPB11P38902 MRPL44YMR225C 297 nt1.37□□□□□ -2.19
RPB11P38902 YMR272W-BYMR272W-B 108 nt1.37□□□□□ -2.19
RPB11P38902 MRPL17YNL252C 846 nt1.37□□□□□ -2.19
RPB11P38902 YAP7YOL028C 738 nt1.37□□□□□ -2.19
RPB11P38902 RPC40YPR110C 1008 nt1.37□□□□□ -2.19
RPB11P38902 CCH1YGR217W 6120 nt1.37□□□□□ -2.19
RPB11P38902 YBP1YBR216C 2025 nt1.37□□□□□ -2.19
RPB11P38902 RTT107YHR154W 3213 nt1.36□□□□□ -2.19
RPB11P38902 VPS16YPL045W 2397 nt1.36□□□□□ -2.19
RPB11P38902 SIR4YDR227W 4077 nt1.36□□□□□ -2.19
RPB11P38902 YGL069CYGL069C 465 nt1.36□□□□□ -2.19
RPB11P38902 YGL101WYGL101W 648 nt1.36□□□□□ -2.19
RPB11P38902 YAL034C-BYAL034C-B 354 nt1.36□□□□□ -2.19
RPB11P38902 SYM1YLR251W 594 nt1.36□□□□□ -2.19
RPB11P38902 MRPS17YMR188C 714 nt1.36□□□□□ -2.19
RPB11P38902 YNL234WYNL234W 1281 nt1.36□□□□□ -2.19
RPB11P38902 YSA1YBR111C 696 nt1.36□□□□□ -2.19
RPB11P38902 MEC1YBR136W 7107 nt1.36□□□□□ -2.19
RPB11P38902 RRP6YOR001W 2202 nt1.36□□□□□ -2.19
RPB11P38902 VPS38YLR360W 1320 nt1.36□□□□□ -2.19
RPB11P38902 FUS1YCL027W 1539 nt1.35□□□□□ -2.19
RPB11P38902 SBE22YHR103W 2559 nt1.35□□□□□ -2.19
RPB11P38902 YFR010W-AYFR010W-A 189 nt1.35□□□□□ -2.19
RPB11P38902 ARI1YGL157W 1044 nt1.35□□□□□ -2.19
RPB11P38902 RPL11BYGR085C 525 nt1.35□□□□□ -2.19
RPB11P38902 DSE2YHR143W 978 nt1.35□□□□□ -2.19
RPB11P38902 RGI2YIL057C 495 nt1.35□□□□□ -2.19
RPB11P38902 RPL11AYPR102C 525 nt1.35□□□□□ -2.19
RPB11P38902 SYO1YDL063C 1863 nt1.35□□□□□ -2.19
RPB11P38902 SOK2YMR016C 2358 nt1.34□□□□□ -2.19
RPB11P38902 HOP1YIL072W 1818 nt1.34□□□□□ -2.19
RPB11P38902 RRP1YDR087C 837 nt1.34□□□□□ -2.19
RPB11P38902 DDI2YFL061W 678 nt1.34□□□□□ -2.19
RPB11P38902 YMR31YFR049W 372 nt1.34□□□□□ -2.19
RPB11P38902 YIL156W-AYIL156W-A 402 nt1.34□□□□□ -2.19
RPB11P38902 NCE101YJL205C 162 nt1.34□□□□□ -2.19
RPB11P38902 PNO1YOR145C 825 nt1.34□□□□□ -2.19
RPB11P38902 YBR277CYBR277C 402 nt1.34□□□□□ -2.19
RPB11P38902 WHI3YNL197C 1986 nt1.34□□□□□ -2.2
RPB11P38902 PCL2YDL127W 927 nt1.33□□□□□ -2.2
RPB11P38902 UBC5YDR059C 447 nt1.33□□□□□ -2.2
RPB11P38902 SPO16YHR153C 597 nt1.33□□□□□ -2.2
RPB11P38902 MRPL24YMR193W 777 nt1.33□□□□□ -2.2
RPB11P38902 YPR014CYPR014C 330 nt1.33□□□□□ -2.2
RPB11P38902 URK1YNR012W 1506 nt1.33□□□□□ -2.2
RPB11P38902 TFC8YPL007C 1767 nt1.33□□□□□ -2.2
RPB11P38902 GAL80YML051W 1308 nt1.33□□□□□ -2.2
RPB11P38902 RPN3YER021W 1572 nt1.33□□□□□ -2.2
RPB11P38902 MAK11YKL021C 1407 nt1.32□□□□□ -2.2
RPB11P38902 YHL012WYHL012W 1482 nt1.32□□□□□ -2.2
RPB11P38902 YCR099CYCR099C 468 nt1.32□□□□□ -2.2
RPB11P38902 SHR3YDL212W 633 nt1.32□□□□□ -2.2
RPB11P38902 DAD4YDR320C-A 219 nt1.32□□□□□ -2.2
RPB11P38902 ATP17YDR377W 306 nt1.32□□□□□ -2.2
RPB11P38902 COBQ0105 1158 nt1.32□□□□□ -2.2
RPB11P38902 SPT15YER148W 723 nt1.32□□□□□ -2.2
RPB11P38902 CKA1YIL035C 1119 nt1.32□□□□□ -2.2
RPB11P38902 RPA12YJR063W 378 nt1.32□□□□□ -2.2
RPB11P38902 CAP1YKL007W 807 nt1.32□□□□□ -2.2
RPB11P38902 TPK3YKL166C 1197 nt1.32□□□□□ -2.2
RPB11P38902 DPB3YBR278W 606 nt1.32□□□□□ -2.2
RPB11P38902 MUB1YMR100W 1863 nt1.32□□□□□ -2.2
RPB11P38902 UPF3YGR072W 1164 nt1.31□□□□□ -2.2
RPB11P38902 AIM18YHR198C 966 nt1.31□□□□□ -2.2
RPB11P38902 NGL1YOL042W 1092 nt1.31□□□□□ -2.2
RPB11P38902 YPR145C-AYPR145C-A 237 nt1.31□□□□□ -2.2
RPB11P38902 snR191snR191 274 nt1.31□□□□□ -2.2
RPB11P38902 YBR174CYBR174C 315 nt1.31□□□□□ -2.2
RPB11P38902 MRPL27YBR282W 441 nt1.31□□□□□ -2.2
RPB11P38902 YLR446WYLR446W 1302 nt1.31□□□□□ -2.2
RPB11P38902 PRP6YBR055C 2700 nt1.3□□□□□ -2.2
RPB11P38902 YDL186WYDL186W 834 nt1.3□□□□□ -2.2
RPB11P38902 DPP1YDR284C 870 nt1.3□□□□□ -2.2
RPB11P38902 NCB2YDR397C 441 nt1.3□□□□□ -2.2
RPB11P38902 YIL161WYIL161W 708 nt1.3□□□□□ -2.2
RPB11P38902 YBR201C-AYBR201C-A 204 nt1.3□□□□□ -2.2
RPB11P38902 RLF2YPR018W 1821 nt1.3□□□□□ -2.2
Retrieved 100 of 7,029 protein–RNA pairs in 30.3 ms