Protein–RNA interactions for Protein: P35452

HOXD12, Homeobox protein Hox-D12, humanhuman

Predictions only

Length 270 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD12P35452 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC20.69■□□□□ 0.9
HOXD12P35452 AC008403.3-201ENST00000598924 454 ntBASIC20.69■□□□□ 0.9
HOXD12P35452 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
HOXD12P35452 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HOXD12P35452 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HOXD12P35452 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.68■□□□□ 0.9
HOXD12P35452 KRT17P1-201ENST00000399211 1546 ntBASIC20.68■□□□□ 0.9
HOXD12P35452 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HOXD12P35452 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HOXD12P35452 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
HOXD12P35452 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.68■□□□□ 0.9
HOXD12P35452 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HOXD12P35452 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC20.68■□□□□ 0.9
HOXD12P35452 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HOXD12P35452 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HOXD12P35452 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.68■□□□□ 0.9
HOXD12P35452 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HOXD12P35452 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
HOXD12P35452 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HOXD12P35452 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HOXD12P35452 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HOXD12P35452 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.67■□□□□ 0.9
HOXD12P35452 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HOXD12P35452 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HOXD12P35452 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
HOXD12P35452 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HOXD12P35452 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
HOXD12P35452 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HOXD12P35452 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HOXD12P35452 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.67■□□□□ 0.9
HOXD12P35452 AC245052.3-201ENST00000450182 901 ntBASIC20.67■□□□□ 0.9
HOXD12P35452 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HOXD12P35452 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC20.67■□□□□ 0.9
HOXD12P35452 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HOXD12P35452 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.67■□□□□ 0.9
HOXD12P35452 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.67■□□□□ 0.9
HOXD12P35452 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HOXD12P35452 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.67■□□□□ 0.9
HOXD12P35452 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HOXD12P35452 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HOXD12P35452 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HOXD12P35452 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HOXD12P35452 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.66■□□□□ 0.9
HOXD12P35452 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
HOXD12P35452 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HOXD12P35452 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HOXD12P35452 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HOXD12P35452 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HOXD12P35452 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
HOXD12P35452 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.66■□□□□ 0.9
HOXD12P35452 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HOXD12P35452 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
HOXD12P35452 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HOXD12P35452 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HOXD12P35452 MCRIP2P1-201ENST00000394346 511 ntBASIC20.66■□□□□ 0.9
HOXD12P35452 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC20.66■□□□□ 0.9
HOXD12P35452 KRT17P3-201ENST00000420566 1262 ntBASIC20.66■□□□□ 0.9
HOXD12P35452 AC091799.1-201ENST00000422823 811 ntBASIC20.66■□□□□ 0.9
HOXD12P35452 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HOXD12P35452 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC20.66■□□□□ 0.9
HOXD12P35452 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.66■□□□□ 0.9
HOXD12P35452 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HOXD12P35452 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.66■□□□□ 0.9
HOXD12P35452 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HOXD12P35452 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.66■□□□□ 0.9
HOXD12P35452 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
HOXD12P35452 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HOXD12P35452 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
HOXD12P35452 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.66■□□□□ 0.9
HOXD12P35452 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HOXD12P35452 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
HOXD12P35452 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.65■□□□□ 0.9
HOXD12P35452 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HOXD12P35452 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.65■□□□□ 0.9
HOXD12P35452 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HOXD12P35452 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
HOXD12P35452 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.65■□□□□ 0.9
HOXD12P35452 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HOXD12P35452 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
HOXD12P35452 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.65■□□□□ 0.9
HOXD12P35452 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.65■□□□□ 0.9
HOXD12P35452 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HOXD12P35452 FAM197Y4-202ENST00000622692 608 ntBASIC20.65■□□□□ 0.9
HOXD12P35452 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HOXD12P35452 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HOXD12P35452 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HOXD12P35452 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
HOXD12P35452 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.64■□□□□ 0.9
HOXD12P35452 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
HOXD12P35452 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
HOXD12P35452 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
HOXD12P35452 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.64■□□□□ 0.89
HOXD12P35452 RPPH1-201ENST00000516869 333 ntBASIC20.64■□□□□ 0.89
HOXD12P35452 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HOXD12P35452 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HOXD12P35452 PNMA6B-201ENST00000538162 1200 ntBASIC20.64■□□□□ 0.89
HOXD12P35452 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
HOXD12P35452 MIR4497-201ENST00000583208 89 ntBASIC20.64■□□□□ 0.89
HOXD12P35452 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC20.64■□□□□ 0.89
HOXD12P35452 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms