Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 SERPINH1-214ENST00000533449 582 ntTSL 316.84■□□□□ 0.293e-8■■■■□ 25.7
RPS3P23396 IDH3B-207ENST00000477689 608 ntTSL 512.53□□□□□ -0.42e-6■■■■□ 25.6
RPS3P23396 IDH3B-204ENST00000466494 677 ntTSL 210.86□□□□□ -0.672e-6■■■■□ 25.6
RPS3P23396 PGK1-201ENST00000373316 4887 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.757e-18■■■■□ 25.6
RPS3P23396 SLC1A4-203ENST00000480594 5789 ntTSL 210.56□□□□□ -0.721e-6■■■■□ 25.6
RPS3P23396 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.74■□□□□ 0.916e-10■■■■□ 25.6
RPS3P23396 H2AFX-201ENST00000375167 1373 ntTSL 215.91■□□□□ 0.146e-10■■■■□ 25.6
RPS3P23396 ERAP1-205ENST00000507154 583 ntTSL 322.67■■□□□ 1.225e-9■■■■□ 25.6
RPS3P23396 ERAP1-207ENST00000508227 555 ntTSL 422.67■■□□□ 1.225e-9■■■■□ 25.6
RPS3P23396 ERAP1-204ENST00000503921 551 ntTSL 422.67■■□□□ 1.225e-9■■■■□ 25.6
RPS3P23396 PDCD6IP-203ENST00000413073 566 ntTSL 418.04■□□□□ 0.485e-9■■■■□ 25.6
RPS3P23396 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.441e-10■■■■□ 25.6
RPS3P23396 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.37■□□□□ 0.373e-6■■■■□ 25.6
RPS3P23396 PNPO-216ENST00000641856 2619 nt17.2■□□□□ 0.343e-6■■■■□ 25.6
RPS3P23396 DPAGT1-210ENST00000481084 2343 ntTSL 216.34■□□□□ 0.211e-10■■■■□ 25.6
RPS3P23396 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.25e-9■■■■□ 25.6
RPS3P23396 PDCD6IP-204ENST00000430877 582 ntTSL 315.71■□□□□ 0.115e-9■■■■□ 25.6
RPS3P23396 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.5■□□□□ 0.075e-9■■■■□ 25.6
RPS3P23396 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC15.44■□□□□ 0.063e-6■■■■□ 25.6
RPS3P23396 PDCD6IP-205ENST00000435909 587 ntTSL 515.38■□□□□ 0.055e-9■■■■□ 25.6
RPS3P23396 DPAGT1-219ENST00000640747 1813 ntTSL 514.7□□□□□ -0.061e-10■■■■□ 25.6
RPS3P23396 PDCD6IP-210ENST00000477798 587 ntTSL 414.13□□□□□ -0.155e-9■■■■□ 25.6
RPS3P23396 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.155e-9■■■■□ 25.6
RPS3P23396 DPAGT1-204ENST00000414373 1638 ntTSL 514.05□□□□□ -0.161e-10■■■■□ 25.6
RPS3P23396 DPAGT1-202ENST00000392834 1817 ntTSL 213.79□□□□□ -0.21e-10■■■■□ 25.6
RPS3P23396 PNPO-212ENST00000641427 1411 nt13.72□□□□□ -0.213e-6■■■■□ 25.6
RPS3P23396 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.237e-7■■■■□ 25.6
RPS3P23396 PNPO-215ENST00000641709 3232 nt13.52□□□□□ -0.243e-6■■■■□ 25.6
RPS3P23396 PNPO-203ENST00000582171 1372 ntTSL 213.48□□□□□ -0.253e-6■■■■□ 25.6
RPS3P23396 DPAGT1-217ENST00000639704 1719 ntTSL 5 BASIC13.47□□□□□ -0.251e-10■■■■□ 25.6
RPS3P23396 DPAGT1-209ENST00000472016 568 ntTSL 213.38□□□□□ -0.271e-10■■■■□ 25.6
RPS3P23396 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC13.12□□□□□ -0.317e-7■■■■□ 25.6
RPS3P23396 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC12.96□□□□□ -0.335e-9■■■■□ 25.6
RPS3P23396 TMEM165-206ENST00000508561 756 ntTSL 512.9□□□□□ -0.344e-7■■■■□ 25.6
RPS3P23396 DPAGT1-207ENST00000460183 1058 ntTSL 212.68□□□□□ -0.381e-10■■■■□ 25.6
RPS3P23396 DPAGT1-201ENST00000354202 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.41e-10■■■■□ 25.6
RPS3P23396 ATP2C1-221ENST00000513801 3439 ntTSL 1 (best) BASIC12.22□□□□□ -0.455e-9■■■■□ 25.6
RPS3P23396 DPAGT1-218ENST00000640102 1195 ntTSL 512.21□□□□□ -0.451e-10■■■■□ 25.6
RPS3P23396 PNPO-217ENST00000642017 3465 ntAPPRIS P1 BASIC12.2□□□□□ -0.463e-6■■■■□ 25.6
RPS3P23396 PNPO-210ENST00000641305 3315 nt11.91□□□□□ -0.53e-6■■■■□ 25.6
RPS3P23396 PNPO-214ENST00000641703 1131 nt11.8□□□□□ -0.523e-6■■■■□ 25.6
RPS3P23396 PNPO-211ENST00000641323 3657 nt11.62□□□□□ -0.553e-6■■■■□ 25.6
RPS3P23396 TMEM165-203ENST00000506103 572 ntTSL 311.41□□□□□ -0.584e-7■■■■□ 25.6
RPS3P23396 ATP2C1-209ENST00000505072 556 ntTSL 411.24□□□□□ -0.615e-9■■■■□ 25.6
RPS3P23396 DPAGT1-206ENST00000445653 583 ntTSL 310.59□□□□□ -0.711e-10■■■■□ 25.6
RPS3P23396 TMEM165-212ENST00000608091 1567 ntTSL 310.46□□□□□ -0.744e-7■■■■□ 25.6
RPS3P23396 PNPO-206ENST00000584061 723 ntTSL 410.18□□□□□ -0.783e-6■■■■□ 25.6
RPS3P23396 NDUFB6-201ENST00000350021 666 ntTSL 2 BASIC9.94□□□□□ -0.827e-7■■■■□ 25.6
RPS3P23396 TMEM165-210ENST00000514904 1522 ntTSL 29.56□□□□□ -0.884e-7■■■■□ 25.6
RPS3P23396 AC018521.1-201ENST00000582262 575 ntTSL 49.22□□□□□ -0.933e-6■■■■□ 25.6
RPS3P23396 DPAGT1-205ENST00000442480 999 ntTSL 57.92□□□□□ -1.141e-10■■■■□ 25.6
RPS3P23396 ERAP1-202ENST00000443439 4805 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.175e-9■■■■□ 25.6
RPS3P23396 ATP2C1-208ENST00000504948 4714 ntTSL 1 (best) BASIC7.75□□□□□ -1.175e-9■■■■□ 25.6
RPS3P23396 PNPO-207ENST00000584806 2940 ntTSL 37.61□□□□□ -1.193e-6■■■■□ 25.6
RPS3P23396 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.585e-9■■■■□ 25.6
RPS3P23396 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.74□□□□□ -1.655e-9■■■■□ 25.6
RPS3P23396 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.45□□□□□ -1.75e-9■■■■□ 25.6
RPS3P23396 TMEM165-207ENST00000509575 570 ntTSL 21.18□□□□□ -2.224e-7■■■■□ 25.6
RPS3P23396 ECH1-216ENST00000601778 799 ntTSL 514.01□□□□□ -0.172e-7■■■■□ 25.6
RPS3P23396 ECH1-201ENST00000221418 1411 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.372e-7■■■■□ 25.6
RPS3P23396 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.22■□□□□ 0.991e-6■■■■□ 25.6
RPS3P23396 SLC47A1-208ENST00000574596 1755 nt20.45■□□□□ 0.865e-7■■■■□ 25.6
RPS3P23396 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.81e-6■■■■□ 25.6
RPS3P23396 CCT7-209ENST00000473197 595 ntTSL 416.33■□□□□ 0.21e-10■■■■□ 25.6
RPS3P23396 MYH10-202ENST00000360416 7762 ntTSL 1 (best) BASIC10.51□□□□□ -0.732e-6■■■■□ 25.6
RPS3P23396 MYH10-201ENST00000269243 7662 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.842e-6■■■■□ 25.6
RPS3P23396 MYH10-203ENST00000379980 7694 ntTSL 1 (best) BASIC9.78□□□□□ -0.842e-6■■■■□ 25.6
RPS3P23396 FDFT1-221ENST00000532266 583 ntTSL 58.51□□□□□ -1.056e-10■■■■□ 25.6
RPS3P23396 F5-201ENST00000367796 7039 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.973e-6■■■■□ 25.6
RPS3P23396 F5-202ENST00000367797 7024 ntAPPRIS P2 TSL 1 (best) BASIC8.99□□□□□ -0.973e-6■■■■□ 25.6
RPS3P23396 RHAG-201ENST00000229810 1283 ntAPPRIS ALT1 TSL 5 BASIC10.62□□□□□ -0.711e-10■■■■□ 25.6
RPS3P23396 RHAG-202ENST00000371175 1912 ntAPPRIS P2 TSL 1 (best) BASIC9.28□□□□□ -0.921e-10■■■■□ 25.6
RPS3P23396 RHAG-203ENST00000618248 1203 ntTSL 5 BASIC8.9□□□□□ -0.981e-10■■■■□ 25.6
RPS3P23396 SELENOP-213ENST00000514403 653 ntTSL 22.83□□□□□ -1.963e-27■■■■□ 25.6
RPS3P23396 AMBP-202ENST00000466610 579 ntTSL 39.85□□□□□ -0.832e-52■■■■□ 25.6
RPS3P23396 BCAP31-208ENST00000468947 409 ntTSL 25.03□□□□□ -1.61e-6■■■■□ 25.6
RPS3P23396 TPP1-205ENST00000524788 553 ntTSL 217.22■□□□□ 0.352e-11■■■■□ 25.6
RPS3P23396 NDUFS7-212ENST00000540530 1707 ntTSL 218.39■□□□□ 0.538e-7■■■■□ 25.6
RPS3P23396 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.74■□□□□ 0.438e-7■■■■□ 25.6
RPS3P23396 NDUFS7-213ENST00000543289 3356 ntTSL 217.67■□□□□ 0.428e-7■■■■□ 25.6
RPS3P23396 NDUFS7-220ENST00000622587 802 ntTSL 517.47■□□□□ 0.398e-7■■■■□ 25.6
RPS3P23396 NDUFS7-207ENST00000538523 931 ntTSL 216.99■□□□□ 0.318e-7■■■■□ 25.6
RPS3P23396 NDUFS7-215ENST00000546172 869 ntTSL 516.97■□□□□ 0.318e-7■■■■□ 25.6
RPS3P23396 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.38e-7■■■■□ 25.6
RPS3P23396 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC15.99■□□□□ 0.158e-7■■■■□ 25.6
RPS3P23396 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC15.22■□□□□ 0.038e-7■■■■□ 25.6
RPS3P23396 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC15.22■□□□□ 0.038e-7■■■■□ 25.6
RPS3P23396 NDUFS7-208ENST00000538662 1186 ntTSL 214.86□□□□□ -0.038e-7■■■■□ 25.6
RPS3P23396 NDUFS7-205ENST00000534853 745 ntTSL 514.61□□□□□ -0.078e-7■■■■□ 25.6
RPS3P23396 NDUFS7-204ENST00000436115 2879 ntTSL 514.54□□□□□ -0.088e-7■■■■□ 25.6
RPS3P23396 NDUFS7-209ENST00000538929 630 ntTSL 414.23□□□□□ -0.138e-7■■■■□ 25.6
RPS3P23396 NDUFS7-206ENST00000535382 3050 ntTSL 213.79□□□□□ -0.28e-7■■■■□ 25.6
RPS3P23396 NDUFS7-214ENST00000545446 3089 ntTSL 213.74□□□□□ -0.218e-7■■■■□ 25.6
RPS3P23396 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC13.64□□□□□ -0.238e-7■■■■□ 25.6
RPS3P23396 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC13.17□□□□□ -0.38e-7■■■■□ 25.6
RPS3P23396 VARS-227ENST00000489979 658 ntTSL 313.17□□□□□ -0.34e-9■■■■□ 25.5
RPS3P23396 GGCX-207ENST00000473665 869 ntTSL 211.62□□□□□ -0.553e-10■■■■□ 25.5
RPS3P23396 SPP1-208ENST00000509334 760 ntTSL 55.12□□□□□ -1.592e-15■■■■□ 25.5
RPS3P23396 SPP1-210ENST00000513981 719 ntTSL 32.9□□□□□ -1.952e-15■■■■□ 25.5
RPS3P23396 DLD-202ENST00000415325 1802 ntTSL 211.27□□□□□ -0.611e-6■■■■□ 25.5
Retrieved 100 of 24,271 protein–RNA pairs in 216.7 ms