Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
KRT4P19013 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.78■□□□□ 0.92
KRT4P19013 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
KRT4P19013 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.78■□□□□ 0.92
KRT4P19013 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
KRT4P19013 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.78■□□□□ 0.92
KRT4P19013 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.78■□□□□ 0.92
KRT4P19013 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
KRT4P19013 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
KRT4P19013 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
KRT4P19013 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
KRT4P19013 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.77■□□□□ 0.92
KRT4P19013 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
KRT4P19013 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.77■□□□□ 0.92
KRT4P19013 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
KRT4P19013 RNF165-205ENST00000588679 2904 ntBASIC20.77■□□□□ 0.92
KRT4P19013 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
KRT4P19013 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.77■□□□□ 0.92
KRT4P19013 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.77■□□□□ 0.92
KRT4P19013 GUSBP5-201ENST00000418136 578 ntBASIC20.77■□□□□ 0.92
KRT4P19013 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.77■□□□□ 0.92
KRT4P19013 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.77■□□□□ 0.92
KRT4P19013 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
KRT4P19013 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.77■□□□□ 0.92
KRT4P19013 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.77■□□□□ 0.92
KRT4P19013 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
KRT4P19013 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
KRT4P19013 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
KRT4P19013 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.77■□□□□ 0.91
KRT4P19013 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
KRT4P19013 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
KRT4P19013 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.76■□□□□ 0.91
KRT4P19013 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
KRT4P19013 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
KRT4P19013 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.76■□□□□ 0.91
KRT4P19013 AL035685.1-201ENST00000636663 812 ntBASIC20.76■□□□□ 0.91
KRT4P19013 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
KRT4P19013 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
KRT4P19013 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.76■□□□□ 0.91
KRT4P19013 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.76■□□□□ 0.91
KRT4P19013 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
KRT4P19013 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
KRT4P19013 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.76■□□□□ 0.91
KRT4P19013 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
KRT4P19013 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
KRT4P19013 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
KRT4P19013 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
KRT4P19013 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.75■□□□□ 0.91
KRT4P19013 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
KRT4P19013 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
KRT4P19013 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
KRT4P19013 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.75■□□□□ 0.91
KRT4P19013 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.75■□□□□ 0.91
KRT4P19013 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.75■□□□□ 0.91
KRT4P19013 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
KRT4P19013 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.75■□□□□ 0.91
KRT4P19013 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
KRT4P19013 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.75■□□□□ 0.91
KRT4P19013 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
KRT4P19013 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
KRT4P19013 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
KRT4P19013 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.75■□□□□ 0.91
KRT4P19013 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
KRT4P19013 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
KRT4P19013 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
KRT4P19013 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
KRT4P19013 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
KRT4P19013 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
KRT4P19013 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
KRT4P19013 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
KRT4P19013 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
KRT4P19013 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
KRT4P19013 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
KRT4P19013 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
KRT4P19013 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.74■□□□□ 0.91
KRT4P19013 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.74■□□□□ 0.91
KRT4P19013 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
KRT4P19013 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
KRT4P19013 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
KRT4P19013 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
KRT4P19013 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
KRT4P19013 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
KRT4P19013 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
KRT4P19013 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.73■□□□□ 0.91
KRT4P19013 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.73■□□□□ 0.91
KRT4P19013 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
KRT4P19013 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.73■□□□□ 0.91
KRT4P19013 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.73■□□□□ 0.91
KRT4P19013 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
KRT4P19013 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
KRT4P19013 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.73■□□□□ 0.91
KRT4P19013 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
KRT4P19013 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.73■□□□□ 0.91
KRT4P19013 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.72■□□□□ 0.91
KRT4P19013 AC099778.1-201ENST00000568593 1911 ntBASIC20.72■□□□□ 0.91
KRT4P19013 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.72■□□□□ 0.91
KRT4P19013 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KRT4P19013 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
KRT4P19013 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KRT4P19013 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms