Protein–RNA interactions for Protein: P17812

CTPS1, CTP synthase 1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1P17812 AC231657.2-201ENST00000624556 255 ntBASIC20.87■□□□□ 0.93
CTPS1P17812 AC013268.1-206ENST00000638368 961 ntBASIC20.87■□□□□ 0.93
CTPS1P17812 AC112229.1-201ENST00000639295 961 ntBASIC20.87■□□□□ 0.93
CTPS1P17812 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
CTPS1P17812 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CTPS1P17812 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
CTPS1P17812 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CTPS1P17812 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CTPS1P17812 AL137060.1-201ENST00000618151 2648 ntBASIC20.87■□□□□ 0.93
CTPS1P17812 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
CTPS1P17812 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CTPS1P17812 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
CTPS1P17812 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CTPS1P17812 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.86■□□□□ 0.93
CTPS1P17812 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CTPS1P17812 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.86■□□□□ 0.93
CTPS1P17812 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
CTPS1P17812 AL049796.1-201ENST00000565336 1766 ntBASIC20.86■□□□□ 0.93
CTPS1P17812 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CTPS1P17812 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
CTPS1P17812 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.86■□□□□ 0.93
CTPS1P17812 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CTPS1P17812 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CTPS1P17812 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CTPS1P17812 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CTPS1P17812 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.85■□□□□ 0.93
CTPS1P17812 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.85■□□□□ 0.93
CTPS1P17812 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CTPS1P17812 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
CTPS1P17812 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CTPS1P17812 AC091799.1-201ENST00000422823 811 ntBASIC20.85■□□□□ 0.93
CTPS1P17812 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.85■□□□□ 0.93
CTPS1P17812 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.85■□□□□ 0.93
CTPS1P17812 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CTPS1P17812 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
CTPS1P17812 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
CTPS1P17812 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
CTPS1P17812 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.84■□□□□ 0.93
CTPS1P17812 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.84■□□□□ 0.93
CTPS1P17812 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CTPS1P17812 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.84■□□□□ 0.93
CTPS1P17812 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.84■□□□□ 0.93
CTPS1P17812 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CTPS1P17812 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CTPS1P17812 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CTPS1P17812 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CTPS1P17812 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CTPS1P17812 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CTPS1P17812 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CTPS1P17812 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CTPS1P17812 MIR663A-201ENST00000385250 93 ntBASIC20.83■□□□□ 0.93
CTPS1P17812 CROCCP5-201ENST00000436658 830 ntBASIC20.83■□□□□ 0.93
CTPS1P17812 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CTPS1P17812 AC005181.1-201ENST00000604782 1256 ntBASIC20.83■□□□□ 0.93
CTPS1P17812 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.83■□□□□ 0.93
CTPS1P17812 AC068338.2-201ENST00000563278 1430 ntBASIC20.83■□□□□ 0.93
CTPS1P17812 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
CTPS1P17812 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CTPS1P17812 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
CTPS1P17812 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CTPS1P17812 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CTPS1P17812 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CTPS1P17812 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
CTPS1P17812 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CTPS1P17812 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.82■□□□□ 0.92
CTPS1P17812 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.82■□□□□ 0.92
CTPS1P17812 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.82■□□□□ 0.92
CTPS1P17812 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.82■□□□□ 0.92
CTPS1P17812 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.82■□□□□ 0.92
CTPS1P17812 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.82■□□□□ 0.92
CTPS1P17812 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.82■□□□□ 0.92
CTPS1P17812 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
CTPS1P17812 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CTPS1P17812 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.82■□□□□ 0.92
CTPS1P17812 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CTPS1P17812 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CTPS1P17812 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CTPS1P17812 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CTPS1P17812 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
CTPS1P17812 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.81■□□□□ 0.92
CTPS1P17812 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CTPS1P17812 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CTPS1P17812 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CTPS1P17812 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
CTPS1P17812 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CTPS1P17812 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.81■□□□□ 0.92
CTPS1P17812 AC007322.4-201ENST00000509611 723 ntBASIC20.81■□□□□ 0.92
CTPS1P17812 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC20.81■□□□□ 0.92
CTPS1P17812 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CTPS1P17812 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.81■□□□□ 0.92
CTPS1P17812 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
CTPS1P17812 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.81■□□□□ 0.92
CTPS1P17812 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.81■□□□□ 0.92
CTPS1P17812 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
CTPS1P17812 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CTPS1P17812 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CTPS1P17812 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.8■□□□□ 0.92
CTPS1P17812 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.8■□□□□ 0.92
CTPS1P17812 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CTPS1P17812 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms