Protein–RNA interactions for Protein: P09001

MRPL3, 39S ribosomal protein L3, mitochondrial, humanhuman

Known RBP Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL3P09001 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
MRPL3P09001 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
MRPL3P09001 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
MRPL3P09001 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.57■□□□□ 0.56
MRPL3P09001 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
MRPL3P09001 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
MRPL3P09001 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
MRPL3P09001 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
MRPL3P09001 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
MRPL3P09001 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC18.56■□□□□ 0.56
MRPL3P09001 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.56■□□□□ 0.56
MRPL3P09001 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
MRPL3P09001 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC18.56■□□□□ 0.56
MRPL3P09001 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC18.56■□□□□ 0.56
MRPL3P09001 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
MRPL3P09001 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
MRPL3P09001 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
MRPL3P09001 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
MRPL3P09001 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
MRPL3P09001 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.56■□□□□ 0.56
MRPL3P09001 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
MRPL3P09001 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
MRPL3P09001 AC009237.3-201ENST00000393279 1427 ntBASIC18.56■□□□□ 0.56
MRPL3P09001 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
MRPL3P09001 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
MRPL3P09001 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
MRPL3P09001 AC055733.4-201ENST00000638462 1354 ntBASIC18.55■□□□□ 0.56
MRPL3P09001 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MRPL3P09001 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MRPL3P09001 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
MRPL3P09001 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MRPL3P09001 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MRPL3P09001 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MRPL3P09001 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.55■□□□□ 0.56
MRPL3P09001 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
MRPL3P09001 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.55■□□□□ 0.56
MRPL3P09001 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
MRPL3P09001 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC18.55■□□□□ 0.56
MRPL3P09001 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC18.55■□□□□ 0.56
MRPL3P09001 IGHV3-19-201ENST00000521488 291 ntBASIC18.55■□□□□ 0.56
MRPL3P09001 AC024257.2-201ENST00000549699 147 ntBASIC18.55■□□□□ 0.56
MRPL3P09001 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
MRPL3P09001 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC18.55■□□□□ 0.56
MRPL3P09001 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
MRPL3P09001 AC007225.1-201ENST00000566331 1836 ntBASIC18.55■□□□□ 0.56
MRPL3P09001 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MRPL3P09001 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
MRPL3P09001 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
MRPL3P09001 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MRPL3P09001 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MRPL3P09001 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.55■□□□□ 0.56
MRPL3P09001 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
MRPL3P09001 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.54■□□□□ 0.56
MRPL3P09001 AFG3L1P-217ENST00000557444 2447 ntBASIC18.54■□□□□ 0.56
MRPL3P09001 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
MRPL3P09001 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MRPL3P09001 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MRPL3P09001 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MRPL3P09001 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MRPL3P09001 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
MRPL3P09001 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
MRPL3P09001 AL136162.1-201ENST00000607711 1078 ntBASIC18.54■□□□□ 0.56
MRPL3P09001 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
MRPL3P09001 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MRPL3P09001 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC18.54■□□□□ 0.56
MRPL3P09001 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.54■□□□□ 0.56
MRPL3P09001 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MRPL3P09001 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.54■□□□□ 0.56
MRPL3P09001 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
MRPL3P09001 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
MRPL3P09001 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
MRPL3P09001 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
MRPL3P09001 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
MRPL3P09001 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.54■□□□□ 0.56
MRPL3P09001 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MRPL3P09001 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.54■□□□□ 0.56
MRPL3P09001 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
MRPL3P09001 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
MRPL3P09001 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.53■□□□□ 0.56
MRPL3P09001 AL121603.2-201ENST00000557373 2117 ntBASIC18.53■□□□□ 0.56
MRPL3P09001 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
MRPL3P09001 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
MRPL3P09001 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC18.53■□□□□ 0.56
MRPL3P09001 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
MRPL3P09001 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MRPL3P09001 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
MRPL3P09001 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MRPL3P09001 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MRPL3P09001 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.53■□□□□ 0.56
MRPL3P09001 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
MRPL3P09001 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
MRPL3P09001 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC18.53■□□□□ 0.56
MRPL3P09001 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC18.53■□□□□ 0.56
MRPL3P09001 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MRPL3P09001 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MRPL3P09001 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.53■□□□□ 0.56
MRPL3P09001 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC18.53■□□□□ 0.56
MRPL3P09001 FP700111.2-201ENST00000619190 1892 ntBASIC18.53■□□□□ 0.56
MRPL3P09001 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
MRPL3P09001 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms