Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
APOA4P06727 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.74■□□□□ 0.91
APOA4P06727 AC034268.1-201ENST00000441047 882 ntBASIC20.74■□□□□ 0.91
APOA4P06727 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.74■□□□□ 0.91
APOA4P06727 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.74■□□□□ 0.91
APOA4P06727 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
APOA4P06727 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
APOA4P06727 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
APOA4P06727 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
APOA4P06727 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
APOA4P06727 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
APOA4P06727 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
APOA4P06727 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.74■□□□□ 0.91
APOA4P06727 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
APOA4P06727 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20.73■□□□□ 0.91
APOA4P06727 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
APOA4P06727 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
APOA4P06727 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
APOA4P06727 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
APOA4P06727 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
APOA4P06727 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.73■□□□□ 0.91
APOA4P06727 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC20.73■□□□□ 0.91
APOA4P06727 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
APOA4P06727 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.73■□□□□ 0.91
APOA4P06727 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
APOA4P06727 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.73■□□□□ 0.91
APOA4P06727 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
APOA4P06727 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
APOA4P06727 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
APOA4P06727 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
APOA4P06727 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
APOA4P06727 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
APOA4P06727 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
APOA4P06727 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
APOA4P06727 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.72■□□□□ 0.91
APOA4P06727 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
APOA4P06727 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.72■□□□□ 0.91
APOA4P06727 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.72■□□□□ 0.91
APOA4P06727 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.72■□□□□ 0.91
APOA4P06727 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
APOA4P06727 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.72■□□□□ 0.91
APOA4P06727 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
APOA4P06727 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
APOA4P06727 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
APOA4P06727 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
APOA4P06727 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
APOA4P06727 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
APOA4P06727 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.72■□□□□ 0.91
APOA4P06727 RARRES2P6-201ENST00000567333 442 ntBASIC20.72■□□□□ 0.91
APOA4P06727 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.72■□□□□ 0.91
APOA4P06727 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC20.72■□□□□ 0.91
APOA4P06727 AC087623.3-201ENST00000607047 1098 ntBASIC20.72■□□□□ 0.91
APOA4P06727 GABARAPL3-202ENST00000624044 1851 ntBASIC20.72■□□□□ 0.91
APOA4P06727 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
APOA4P06727 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
APOA4P06727 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
APOA4P06727 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.72■□□□□ 0.91
APOA4P06727 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
APOA4P06727 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
APOA4P06727 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
APOA4P06727 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.71■□□□□ 0.91
APOA4P06727 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
APOA4P06727 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.71■□□□□ 0.91
APOA4P06727 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
APOA4P06727 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
APOA4P06727 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
APOA4P06727 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.71■□□□□ 0.91
APOA4P06727 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
APOA4P06727 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
APOA4P06727 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.71■□□□□ 0.91
APOA4P06727 DUX4L2-201ENST00000561772 1275 ntBASIC20.71■□□□□ 0.91
APOA4P06727 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.71■□□□□ 0.91
APOA4P06727 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.71■□□□□ 0.91
APOA4P06727 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.71■□□□□ 0.91
APOA4P06727 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.71■□□□□ 0.91
APOA4P06727 DUX4L6-201ENST00000626483 1275 ntBASIC20.71■□□□□ 0.91
APOA4P06727 DUX4L1-201ENST00000627662 1275 ntBASIC20.71■□□□□ 0.91
APOA4P06727 DUX4L8-201ENST00000629013 1275 ntBASIC20.71■□□□□ 0.91
APOA4P06727 DUX4L3-201ENST00000630187 1275 ntBASIC20.71■□□□□ 0.91
APOA4P06727 DUX4L7-201ENST00000630678 1275 ntBASIC20.71■□□□□ 0.91
APOA4P06727 DUX4L5-201ENST00000630834 1275 ntBASIC20.71■□□□□ 0.91
APOA4P06727 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.71■□□□□ 0.91
APOA4P06727 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
APOA4P06727 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.71■□□□□ 0.91
APOA4P06727 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
APOA4P06727 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
APOA4P06727 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
APOA4P06727 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.7■□□□□ 0.9
APOA4P06727 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
APOA4P06727 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
APOA4P06727 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
APOA4P06727 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
APOA4P06727 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
APOA4P06727 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
APOA4P06727 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.7■□□□□ 0.9
APOA4P06727 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.7■□□□□ 0.9
APOA4P06727 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20.7■□□□□ 0.9
APOA4P06727 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.7■□□□□ 0.9
APOA4P06727 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.7■□□□□ 0.9
APOA4P06727 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms