Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC21.06■□□□□ 0.96
HLA-DQB2P05538 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
HLA-DQB2P05538 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
HLA-DQB2P05538 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
HLA-DQB2P05538 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
HLA-DQB2P05538 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HLA-DQB2P05538 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HLA-DQB2P05538 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC21.05■□□□□ 0.96
HLA-DQB2P05538 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC21.05■□□□□ 0.96
HLA-DQB2P05538 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.05■□□□□ 0.96
HLA-DQB2P05538 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC21.05■□□□□ 0.96
HLA-DQB2P05538 AC091799.1-201ENST00000422823 811 ntBASIC21.05■□□□□ 0.96
HLA-DQB2P05538 PARL-206ENST00000435888 1098 ntTSL 5 BASIC21.05■□□□□ 0.96
HLA-DQB2P05538 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
HLA-DQB2P05538 IKBKGP1-201ENST00000612193 1073 ntBASIC21.05■□□□□ 0.96
HLA-DQB2P05538 AC010536.3-201ENST00000620306 533 ntBASIC21.05■□□□□ 0.96
HLA-DQB2P05538 AC092437.1-201ENST00000624794 1048 ntBASIC21.05■□□□□ 0.96
HLA-DQB2P05538 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
HLA-DQB2P05538 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
HLA-DQB2P05538 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HLA-DQB2P05538 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HLA-DQB2P05538 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC21.04■□□□□ 0.96
HLA-DQB2P05538 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
HLA-DQB2P05538 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
HLA-DQB2P05538 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
HLA-DQB2P05538 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HLA-DQB2P05538 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
HLA-DQB2P05538 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
HLA-DQB2P05538 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC21.04■□□□□ 0.96
HLA-DQB2P05538 PTPA-214ENST00000423100 988 ntTSL 2 BASIC21.04■□□□□ 0.96
HLA-DQB2P05538 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
HLA-DQB2P05538 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC21.04■□□□□ 0.96
HLA-DQB2P05538 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.04■□□□□ 0.96
HLA-DQB2P05538 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
HLA-DQB2P05538 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
HLA-DQB2P05538 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC21.04■□□□□ 0.96
HLA-DQB2P05538 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
HLA-DQB2P05538 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
HLA-DQB2P05538 ERF-202ENST00000440177 2032 ntTSL 2 BASIC21.04■□□□□ 0.96
HLA-DQB2P05538 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
HLA-DQB2P05538 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC21.04■□□□□ 0.96
HLA-DQB2P05538 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC21.04■□□□□ 0.96
HLA-DQB2P05538 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC21.03■□□□□ 0.96
HLA-DQB2P05538 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
HLA-DQB2P05538 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.03■□□□□ 0.96
HLA-DQB2P05538 AC006128.1-201ENST00000624704 1661 ntBASIC21.03■□□□□ 0.96
HLA-DQB2P05538 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HLA-DQB2P05538 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HLA-DQB2P05538 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HLA-DQB2P05538 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC21.03■□□□□ 0.96
HLA-DQB2P05538 AC011767.1-201ENST00000617410 1153 ntBASIC21.03■□□□□ 0.96
HLA-DQB2P05538 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HLA-DQB2P05538 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC21.03■□□□□ 0.96
HLA-DQB2P05538 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC21.03■□□□□ 0.96
HLA-DQB2P05538 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC21.03■□□□□ 0.96
HLA-DQB2P05538 AC011484.1-201ENST00000377652 1995 ntBASIC21.03■□□□□ 0.96
HLA-DQB2P05538 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
HLA-DQB2P05538 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
HLA-DQB2P05538 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21.02■□□□□ 0.96
HLA-DQB2P05538 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
HLA-DQB2P05538 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HLA-DQB2P05538 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HLA-DQB2P05538 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HLA-DQB2P05538 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
HLA-DQB2P05538 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC21.02■□□□□ 0.96
HLA-DQB2P05538 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
HLA-DQB2P05538 TERF1P5-201ENST00000477545 1207 ntBASIC21.02■□□□□ 0.96
HLA-DQB2P05538 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC21.02■□□□□ 0.96
HLA-DQB2P05538 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.02■□□□□ 0.96
HLA-DQB2P05538 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
HLA-DQB2P05538 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HLA-DQB2P05538 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
HLA-DQB2P05538 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
HLA-DQB2P05538 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC21.02■□□□□ 0.95
HLA-DQB2P05538 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
HLA-DQB2P05538 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC21.01■□□□□ 0.95
HLA-DQB2P05538 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HLA-DQB2P05538 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HLA-DQB2P05538 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
HLA-DQB2P05538 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC21.01■□□□□ 0.95
HLA-DQB2P05538 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
HLA-DQB2P05538 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC21.01■□□□□ 0.95
HLA-DQB2P05538 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
HLA-DQB2P05538 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HLA-DQB2P05538 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
HLA-DQB2P05538 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC21.01■□□□□ 0.95
HLA-DQB2P05538 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC21.01■□□□□ 0.95
HLA-DQB2P05538 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC21.01■□□□□ 0.95
HLA-DQB2P05538 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC21.01■□□□□ 0.95
HLA-DQB2P05538 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
HLA-DQB2P05538 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
HLA-DQB2P05538 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
HLA-DQB2P05538 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HLA-DQB2P05538 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
HLA-DQB2P05538 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
HLA-DQB2P05538 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
HLA-DQB2P05538 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC21■□□□□ 0.95
HLA-DQB2P05538 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21■□□□□ 0.95
HLA-DQB2P05538 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HLA-DQB2P05538 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms