Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KRT6AP02538 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
KRT6AP02538 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
KRT6AP02538 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.04■□□□□ 0.8
KRT6AP02538 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.04■□□□□ 0.8
KRT6AP02538 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KRT6AP02538 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
KRT6AP02538 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
KRT6AP02538 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.04■□□□□ 0.8
KRT6AP02538 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KRT6AP02538 AC027612.3-201ENST00000413684 1047 ntBASIC20.04■□□□□ 0.8
KRT6AP02538 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.04■□□□□ 0.8
KRT6AP02538 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.04■□□□□ 0.8
KRT6AP02538 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KRT6AP02538 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
KRT6AP02538 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KRT6AP02538 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KRT6AP02538 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KRT6AP02538 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
KRT6AP02538 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KRT6AP02538 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
KRT6AP02538 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
KRT6AP02538 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
KRT6AP02538 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
KRT6AP02538 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KRT6AP02538 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
KRT6AP02538 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KRT6AP02538 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.03■□□□□ 0.8
KRT6AP02538 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
KRT6AP02538 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KRT6AP02538 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.03■□□□□ 0.8
KRT6AP02538 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KRT6AP02538 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.03■□□□□ 0.8
KRT6AP02538 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
KRT6AP02538 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
KRT6AP02538 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
KRT6AP02538 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
KRT6AP02538 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
KRT6AP02538 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
KRT6AP02538 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
KRT6AP02538 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
KRT6AP02538 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
KRT6AP02538 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
KRT6AP02538 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
KRT6AP02538 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
KRT6AP02538 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.02■□□□□ 0.8
KRT6AP02538 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
KRT6AP02538 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
KRT6AP02538 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
KRT6AP02538 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
KRT6AP02538 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.8
KRT6AP02538 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
KRT6AP02538 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
KRT6AP02538 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
KRT6AP02538 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.02■□□□□ 0.79
KRT6AP02538 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
KRT6AP02538 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
KRT6AP02538 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.01■□□□□ 0.79
KRT6AP02538 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
KRT6AP02538 LINC02228-203ENST00000641970 1355 ntBASIC20.01■□□□□ 0.79
KRT6AP02538 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.01■□□□□ 0.79
KRT6AP02538 MIR638-201ENST00000385237 100 ntBASIC20.01■□□□□ 0.79
KRT6AP02538 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.01■□□□□ 0.79
KRT6AP02538 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.01■□□□□ 0.79
KRT6AP02538 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
KRT6AP02538 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.01■□□□□ 0.79
KRT6AP02538 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
KRT6AP02538 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
KRT6AP02538 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
KRT6AP02538 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
KRT6AP02538 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20■□□□□ 0.79
KRT6AP02538 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20■□□□□ 0.79
KRT6AP02538 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
KRT6AP02538 LINC01006-201ENST00000333319 2292 ntBASIC20■□□□□ 0.79
KRT6AP02538 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
KRT6AP02538 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
KRT6AP02538 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
KRT6AP02538 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
KRT6AP02538 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20■□□□□ 0.79
KRT6AP02538 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
KRT6AP02538 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20■□□□□ 0.79
KRT6AP02538 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20■□□□□ 0.79
KRT6AP02538 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20■□□□□ 0.79
KRT6AP02538 AC138907.5-202ENST00000569484 235 ntBASIC20■□□□□ 0.79
KRT6AP02538 AC120498.10-201ENST00000621827 505 ntBASIC20■□□□□ 0.79
KRT6AP02538 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
KRT6AP02538 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20■□□□□ 0.79
KRT6AP02538 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20■□□□□ 0.79
KRT6AP02538 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20■□□□□ 0.79
KRT6AP02538 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
KRT6AP02538 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
KRT6AP02538 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20■□□□□ 0.79
KRT6AP02538 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.99■□□□□ 0.79
KRT6AP02538 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
KRT6AP02538 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
KRT6AP02538 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.99■□□□□ 0.79
KRT6AP02538 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
KRT6AP02538 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
KRT6AP02538 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
KRT6AP02538 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms