Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC21.08■□□□□ 0.97
PDGFBP01127 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
PDGFBP01127 AP003071.4-201ENST00000562276 1284 ntBASIC21.08■□□□□ 0.97
PDGFBP01127 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC21.08■□□□□ 0.97
PDGFBP01127 AC092068.2-201ENST00000590491 1708 ntBASIC21.08■□□□□ 0.97
PDGFBP01127 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PDGFBP01127 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PDGFBP01127 MIR6786-201ENST00000616843 113 ntBASIC21.08■□□□□ 0.97
PDGFBP01127 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.08■□□□□ 0.96
PDGFBP01127 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PDGFBP01127 AC137767.1-201ENST00000602918 1920 ntBASIC21.08■□□□□ 0.96
PDGFBP01127 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC21.08■□□□□ 0.96
PDGFBP01127 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PDGFBP01127 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
PDGFBP01127 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PDGFBP01127 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC21.07■□□□□ 0.96
PDGFBP01127 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.07■□□□□ 0.96
PDGFBP01127 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC21.07■□□□□ 0.96
PDGFBP01127 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PDGFBP01127 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC21.07■□□□□ 0.96
PDGFBP01127 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC21.07■□□□□ 0.96
PDGFBP01127 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
PDGFBP01127 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC21.07■□□□□ 0.96
PDGFBP01127 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC21.07■□□□□ 0.96
PDGFBP01127 AC120498.8-201ENST00000614275 531 ntBASIC21.07■□□□□ 0.96
PDGFBP01127 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
PDGFBP01127 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.07■□□□□ 0.96
PDGFBP01127 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
PDGFBP01127 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
PDGFBP01127 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
PDGFBP01127 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC21.06■□□□□ 0.96
PDGFBP01127 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.06■□□□□ 0.96
PDGFBP01127 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
PDGFBP01127 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
PDGFBP01127 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PDGFBP01127 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.06■□□□□ 0.96
PDGFBP01127 CYP21A1P-202ENST00000354927 1481 ntBASIC21.06■□□□□ 0.96
PDGFBP01127 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC21.06■□□□□ 0.96
PDGFBP01127 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PDGFBP01127 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PDGFBP01127 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC21.05■□□□□ 0.96
PDGFBP01127 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PDGFBP01127 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
PDGFBP01127 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC21.05■□□□□ 0.96
PDGFBP01127 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC21.05■□□□□ 0.96
PDGFBP01127 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PDGFBP01127 AC005521.1-201ENST00000393351 872 ntBASIC21.05■□□□□ 0.96
PDGFBP01127 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
PDGFBP01127 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC21.05■□□□□ 0.96
PDGFBP01127 AC105020.6-201ENST00000621523 1217 ntBASIC21.05■□□□□ 0.96
PDGFBP01127 AC006557.6-201ENST00000623071 864 ntBASIC21.05■□□□□ 0.96
PDGFBP01127 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC21.05■□□□□ 0.96
PDGFBP01127 CABP2-204ENST00000636477 941 ntTSL 5 BASIC21.05■□□□□ 0.96
PDGFBP01127 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PDGFBP01127 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PDGFBP01127 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PDGFBP01127 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC21.05■□□□□ 0.96
PDGFBP01127 AC003102.1-202ENST00000563394 1796 ntBASIC21.05■□□□□ 0.96
PDGFBP01127 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PDGFBP01127 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PDGFBP01127 AC020928.2-201ENST00000588717 2197 ntBASIC21.04■□□□□ 0.96
PDGFBP01127 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PDGFBP01127 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PDGFBP01127 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PDGFBP01127 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PDGFBP01127 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PDGFBP01127 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PDGFBP01127 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
PDGFBP01127 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
PDGFBP01127 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC21.04■□□□□ 0.96
PDGFBP01127 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC21.04■□□□□ 0.96
PDGFBP01127 P4HB-223ENST00000576390 439 ntTSL 4 BASIC21.04■□□□□ 0.96
PDGFBP01127 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PDGFBP01127 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
PDGFBP01127 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
PDGFBP01127 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PDGFBP01127 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PDGFBP01127 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC21.03■□□□□ 0.96
PDGFBP01127 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
PDGFBP01127 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PDGFBP01127 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PDGFBP01127 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
PDGFBP01127 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PDGFBP01127 BRWD1-AS2-201ENST00000603064 1028 ntBASIC21.03■□□□□ 0.96
PDGFBP01127 AC005363.2-201ENST00000618631 242 ntBASIC21.03■□□□□ 0.96
PDGFBP01127 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.03■□□□□ 0.96
PDGFBP01127 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC21.03■□□□□ 0.96
PDGFBP01127 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PDGFBP01127 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PDGFBP01127 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PDGFBP01127 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PDGFBP01127 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
PDGFBP01127 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC21.02■□□□□ 0.96
PDGFBP01127 SAPCD2P1-201ENST00000395413 1184 ntBASIC21.02■□□□□ 0.96
PDGFBP01127 SAPCD2P4-201ENST00000424595 1171 ntBASIC21.02■□□□□ 0.96
PDGFBP01127 AC007322.3-201ENST00000426526 701 ntBASIC21.02■□□□□ 0.96
PDGFBP01127 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC21.02■□□□□ 0.96
PDGFBP01127 KRT18P57-201ENST00000443599 1254 ntBASIC21.02■□□□□ 0.96
PDGFBP01127 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21.02■□□□□ 0.96
PDGFBP01127 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms