Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
ALDH1A1P00352 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
ALDH1A1P00352 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
ALDH1A1P00352 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC23.94■■□□□ 1.42
ALDH1A1P00352 TPM1-226ENST00000560959 925 ntTSL 2 BASIC23.94■■□□□ 1.42
ALDH1A1P00352 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC23.94■■□□□ 1.42
ALDH1A1P00352 AL353708.3-201ENST00000610272 989 ntBASIC23.94■■□□□ 1.42
ALDH1A1P00352 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC23.94■■□□□ 1.42
ALDH1A1P00352 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC23.94■■□□□ 1.42
ALDH1A1P00352 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
ALDH1A1P00352 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC23.94■■□□□ 1.42
ALDH1A1P00352 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
ALDH1A1P00352 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC23.94■■□□□ 1.42
ALDH1A1P00352 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC23.93■■□□□ 1.42
ALDH1A1P00352 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC23.93■■□□□ 1.42
ALDH1A1P00352 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
ALDH1A1P00352 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
ALDH1A1P00352 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
ALDH1A1P00352 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC23.93■■□□□ 1.42
ALDH1A1P00352 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC23.93■■□□□ 1.42
ALDH1A1P00352 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
ALDH1A1P00352 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
ALDH1A1P00352 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC23.93■■□□□ 1.42
ALDH1A1P00352 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
ALDH1A1P00352 RMI2-205ENST00000576027 818 ntTSL 2 BASIC23.93■■□□□ 1.42
ALDH1A1P00352 AC092865.7-201ENST00000641832 219 ntBASIC23.93■■□□□ 1.42
ALDH1A1P00352 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
ALDH1A1P00352 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
ALDH1A1P00352 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
ALDH1A1P00352 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
ALDH1A1P00352 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
ALDH1A1P00352 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
ALDH1A1P00352 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC23.92■■□□□ 1.42
ALDH1A1P00352 AC020928.2-201ENST00000588717 2197 ntBASIC23.92■■□□□ 1.42
ALDH1A1P00352 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC23.92■■□□□ 1.42
ALDH1A1P00352 MMP23A-201ENST00000234610 1017 ntBASIC23.92■■□□□ 1.42
ALDH1A1P00352 PTPA-214ENST00000423100 988 ntTSL 2 BASIC23.92■■□□□ 1.42
ALDH1A1P00352 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC23.92■■□□□ 1.42
ALDH1A1P00352 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC23.92■■□□□ 1.42
ALDH1A1P00352 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC23.92■■□□□ 1.42
ALDH1A1P00352 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
ALDH1A1P00352 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
ALDH1A1P00352 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC23.92■■□□□ 1.42
ALDH1A1P00352 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
ALDH1A1P00352 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC23.91■■□□□ 1.42
ALDH1A1P00352 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
ALDH1A1P00352 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC23.91■■□□□ 1.42
ALDH1A1P00352 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
ALDH1A1P00352 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC23.91■■□□□ 1.42
ALDH1A1P00352 AC026471.5-201ENST00000615068 467 ntBASIC23.91■■□□□ 1.42
ALDH1A1P00352 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC23.91■■□□□ 1.42
ALDH1A1P00352 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC23.91■■□□□ 1.42
ALDH1A1P00352 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
ALDH1A1P00352 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
ALDH1A1P00352 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC23.9■■□□□ 1.42
ALDH1A1P00352 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
ALDH1A1P00352 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
ALDH1A1P00352 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
ALDH1A1P00352 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC23.9■■□□□ 1.42
ALDH1A1P00352 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
ALDH1A1P00352 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
ALDH1A1P00352 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC23.89■■□□□ 1.41
ALDH1A1P00352 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC23.89■■□□□ 1.41
ALDH1A1P00352 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
ALDH1A1P00352 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC23.89■■□□□ 1.41
ALDH1A1P00352 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC23.89■■□□□ 1.41
ALDH1A1P00352 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC23.89■■□□□ 1.41
ALDH1A1P00352 AC005829.2-201ENST00000571422 1056 ntBASIC23.89■■□□□ 1.41
ALDH1A1P00352 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC23.89■■□□□ 1.41
ALDH1A1P00352 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC23.89■■□□□ 1.41
ALDH1A1P00352 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
ALDH1A1P00352 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
ALDH1A1P00352 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
ALDH1A1P00352 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
ALDH1A1P00352 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
ALDH1A1P00352 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC23.88■■□□□ 1.41
ALDH1A1P00352 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC23.88■■□□□ 1.41
ALDH1A1P00352 AP003071.4-201ENST00000562276 1284 ntBASIC23.88■■□□□ 1.41
ALDH1A1P00352 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC23.88■■□□□ 1.41
ALDH1A1P00352 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
ALDH1A1P00352 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC23.88■■□□□ 1.41
ALDH1A1P00352 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
ALDH1A1P00352 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
ALDH1A1P00352 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC23.88■■□□□ 1.41
ALDH1A1P00352 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC23.88■■□□□ 1.41
ALDH1A1P00352 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
ALDH1A1P00352 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
ALDH1A1P00352 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
ALDH1A1P00352 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
ALDH1A1P00352 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
ALDH1A1P00352 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
ALDH1A1P00352 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
ALDH1A1P00352 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
ALDH1A1P00352 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
ALDH1A1P00352 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
ALDH1A1P00352 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
ALDH1A1P00352 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
ALDH1A1P00352 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC23.87■■□□□ 1.41
ALDH1A1P00352 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
ALDH1A1P00352 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms