Protein–RNA interactions for Protein: O75631

UPK3A, Uroplakin-3a, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3AO75631 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
UPK3AO75631 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.57■□□□□ 0.56
UPK3AO75631 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
UPK3AO75631 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
UPK3AO75631 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
UPK3AO75631 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
UPK3AO75631 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.56■□□□□ 0.56
UPK3AO75631 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
UPK3AO75631 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
UPK3AO75631 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
UPK3AO75631 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC18.56■□□□□ 0.56
UPK3AO75631 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
UPK3AO75631 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
UPK3AO75631 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
UPK3AO75631 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
UPK3AO75631 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
UPK3AO75631 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
UPK3AO75631 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
UPK3AO75631 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
UPK3AO75631 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.55■□□□□ 0.56
UPK3AO75631 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
UPK3AO75631 STX7-201ENST00000367937 1090 ntTSL 5 BASIC18.55■□□□□ 0.56
UPK3AO75631 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
UPK3AO75631 POU5F1P4-201ENST00000413175 1085 ntBASIC18.55■□□□□ 0.56
UPK3AO75631 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
UPK3AO75631 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC18.55■□□□□ 0.56
UPK3AO75631 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC18.55■□□□□ 0.56
UPK3AO75631 DBI-210ENST00000542275 757 ntTSL 5 BASIC18.55■□□□□ 0.56
UPK3AO75631 SLC7A5P2-201ENST00000553010 536 ntBASIC18.55■□□□□ 0.56
UPK3AO75631 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC18.55■□□□□ 0.56
UPK3AO75631 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
UPK3AO75631 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
UPK3AO75631 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
UPK3AO75631 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
UPK3AO75631 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
UPK3AO75631 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
UPK3AO75631 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
UPK3AO75631 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
UPK3AO75631 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
UPK3AO75631 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
UPK3AO75631 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UPK3AO75631 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
UPK3AO75631 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.54■□□□□ 0.56
UPK3AO75631 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UPK3AO75631 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.54■□□□□ 0.56
UPK3AO75631 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UPK3AO75631 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
UPK3AO75631 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
UPK3AO75631 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UPK3AO75631 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.54■□□□□ 0.56
UPK3AO75631 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC18.54■□□□□ 0.56
UPK3AO75631 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC18.54■□□□□ 0.56
UPK3AO75631 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC18.54■□□□□ 0.56
UPK3AO75631 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
UPK3AO75631 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
UPK3AO75631 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC18.54■□□□□ 0.56
UPK3AO75631 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
UPK3AO75631 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
UPK3AO75631 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
UPK3AO75631 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
UPK3AO75631 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC18.53■□□□□ 0.56
UPK3AO75631 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
UPK3AO75631 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
UPK3AO75631 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
UPK3AO75631 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
UPK3AO75631 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
UPK3AO75631 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
UPK3AO75631 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.53■□□□□ 0.56
UPK3AO75631 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
UPK3AO75631 PARL-206ENST00000435888 1098 ntTSL 5 BASIC18.53■□□□□ 0.56
UPK3AO75631 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
UPK3AO75631 AC137761.2-201ENST00000561729 223 ntBASIC18.53■□□□□ 0.56
UPK3AO75631 AC145350.3-201ENST00000569033 163 ntBASIC18.53■□□□□ 0.56
UPK3AO75631 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC18.53■□□□□ 0.56
UPK3AO75631 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC18.53■□□□□ 0.56
UPK3AO75631 AC022517.1-201ENST00000592429 346 ntBASIC18.53■□□□□ 0.56
UPK3AO75631 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
UPK3AO75631 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.53■□□□□ 0.56
UPK3AO75631 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.53■□□□□ 0.56
UPK3AO75631 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.53■□□□□ 0.56
UPK3AO75631 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
UPK3AO75631 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
UPK3AO75631 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
UPK3AO75631 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
UPK3AO75631 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
UPK3AO75631 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.52■□□□□ 0.56
UPK3AO75631 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
UPK3AO75631 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.52■□□□□ 0.56
UPK3AO75631 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.52■□□□□ 0.56
UPK3AO75631 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
UPK3AO75631 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC18.52■□□□□ 0.56
UPK3AO75631 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.52■□□□□ 0.56
UPK3AO75631 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
UPK3AO75631 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.52■□□□□ 0.56
UPK3AO75631 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
UPK3AO75631 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
UPK3AO75631 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
UPK3AO75631 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
UPK3AO75631 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
UPK3AO75631 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms