Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
GPC4O75487 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.71■□□□□ 0.91
GPC4O75487 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC20.71■□□□□ 0.91
GPC4O75487 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC20.71■□□□□ 0.91
GPC4O75487 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.71■□□□□ 0.91
GPC4O75487 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20.71■□□□□ 0.91
GPC4O75487 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20.71■□□□□ 0.91
GPC4O75487 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.71■□□□□ 0.91
GPC4O75487 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.71■□□□□ 0.91
GPC4O75487 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.71■□□□□ 0.91
GPC4O75487 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
GPC4O75487 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
GPC4O75487 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.71■□□□□ 0.91
GPC4O75487 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
GPC4O75487 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.71■□□□□ 0.91
GPC4O75487 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.71■□□□□ 0.91
GPC4O75487 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.71■□□□□ 0.91
GPC4O75487 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.71■□□□□ 0.91
GPC4O75487 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
GPC4O75487 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
GPC4O75487 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
GPC4O75487 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
GPC4O75487 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
GPC4O75487 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
GPC4O75487 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
GPC4O75487 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
GPC4O75487 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
GPC4O75487 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
GPC4O75487 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.7■□□□□ 0.9
GPC4O75487 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.7■□□□□ 0.9
GPC4O75487 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC20.7■□□□□ 0.9
GPC4O75487 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.7■□□□□ 0.9
GPC4O75487 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.7■□□□□ 0.9
GPC4O75487 KRT18P61-201ENST00000585825 1298 ntBASIC20.7■□□□□ 0.9
GPC4O75487 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
GPC4O75487 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.7■□□□□ 0.9
GPC4O75487 AC073130.3-201ENST00000624389 2278 ntBASIC20.7■□□□□ 0.9
GPC4O75487 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
GPC4O75487 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
GPC4O75487 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
GPC4O75487 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
GPC4O75487 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
GPC4O75487 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.69■□□□□ 0.9
GPC4O75487 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.69■□□□□ 0.9
GPC4O75487 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
GPC4O75487 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
GPC4O75487 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC20.69■□□□□ 0.9
GPC4O75487 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
GPC4O75487 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
GPC4O75487 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
GPC4O75487 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.69■□□□□ 0.9
GPC4O75487 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
GPC4O75487 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.69■□□□□ 0.9
GPC4O75487 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
GPC4O75487 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
GPC4O75487 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
GPC4O75487 AC004854.2-201ENST00000608450 1441 ntBASIC20.69■□□□□ 0.9
GPC4O75487 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
GPC4O75487 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
GPC4O75487 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
GPC4O75487 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
GPC4O75487 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
GPC4O75487 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
GPC4O75487 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
GPC4O75487 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC20.68■□□□□ 0.9
GPC4O75487 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.68■□□□□ 0.9
GPC4O75487 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC20.68■□□□□ 0.9
GPC4O75487 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
GPC4O75487 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.68■□□□□ 0.9
GPC4O75487 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
GPC4O75487 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.68■□□□□ 0.9
GPC4O75487 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.68■□□□□ 0.9
GPC4O75487 AC138907.5-202ENST00000569484 235 ntBASIC20.68■□□□□ 0.9
GPC4O75487 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
GPC4O75487 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
GPC4O75487 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
GPC4O75487 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
GPC4O75487 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
GPC4O75487 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.68■□□□□ 0.9
GPC4O75487 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.67■□□□□ 0.9
GPC4O75487 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
GPC4O75487 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
GPC4O75487 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
GPC4O75487 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
GPC4O75487 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.67■□□□□ 0.9
GPC4O75487 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
GPC4O75487 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.67■□□□□ 0.9
GPC4O75487 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.67■□□□□ 0.9
GPC4O75487 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.67■□□□□ 0.9
GPC4O75487 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
GPC4O75487 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
GPC4O75487 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.66■□□□□ 0.9
GPC4O75487 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
GPC4O75487 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
GPC4O75487 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
GPC4O75487 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
GPC4O75487 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC20.66■□□□□ 0.9
GPC4O75487 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
GPC4O75487 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.66■□□□□ 0.9
GPC4O75487 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms