Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
SCN2BO60939 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
SCN2BO60939 AC007225.1-201ENST00000566331 1836 ntBASIC19.65■□□□□ 0.74
SCN2BO60939 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.65■□□□□ 0.74
SCN2BO60939 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SCN2BO60939 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SCN2BO60939 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.65■□□□□ 0.74
SCN2BO60939 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SCN2BO60939 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.65■□□□□ 0.74
SCN2BO60939 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SCN2BO60939 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.65■□□□□ 0.74
SCN2BO60939 AL139246.5-201ENST00000606645 996 ntBASIC19.65■□□□□ 0.74
SCN2BO60939 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
SCN2BO60939 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.65■□□□□ 0.74
SCN2BO60939 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SCN2BO60939 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SCN2BO60939 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SCN2BO60939 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SCN2BO60939 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.65■□□□□ 0.74
SCN2BO60939 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SCN2BO60939 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.65■□□□□ 0.74
SCN2BO60939 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.64■□□□□ 0.74
SCN2BO60939 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SCN2BO60939 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.64■□□□□ 0.73
SCN2BO60939 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.64■□□□□ 0.73
SCN2BO60939 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.64■□□□□ 0.73
SCN2BO60939 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SCN2BO60939 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SCN2BO60939 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
SCN2BO60939 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
SCN2BO60939 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SCN2BO60939 AC027702.1-201ENST00000563810 1770 ntBASIC19.64■□□□□ 0.73
SCN2BO60939 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.64■□□□□ 0.73
SCN2BO60939 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SCN2BO60939 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.73
SCN2BO60939 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SCN2BO60939 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.64■□□□□ 0.73
SCN2BO60939 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SCN2BO60939 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
SCN2BO60939 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SCN2BO60939 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
SCN2BO60939 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SCN2BO60939 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.63■□□□□ 0.73
SCN2BO60939 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SCN2BO60939 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SCN2BO60939 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SCN2BO60939 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
SCN2BO60939 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SCN2BO60939 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.63■□□□□ 0.73
SCN2BO60939 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.63■□□□□ 0.73
SCN2BO60939 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.63■□□□□ 0.73
SCN2BO60939 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.63■□□□□ 0.73
SCN2BO60939 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SCN2BO60939 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SCN2BO60939 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.63■□□□□ 0.73
SCN2BO60939 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
SCN2BO60939 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
SCN2BO60939 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SCN2BO60939 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
SCN2BO60939 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.62■□□□□ 0.73
SCN2BO60939 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.62■□□□□ 0.73
SCN2BO60939 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
SCN2BO60939 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SCN2BO60939 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SCN2BO60939 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
SCN2BO60939 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SCN2BO60939 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SCN2BO60939 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
SCN2BO60939 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.62■□□□□ 0.73
SCN2BO60939 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SCN2BO60939 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.62■□□□□ 0.73
SCN2BO60939 AL358852.1-201ENST00000623174 1268 ntBASIC19.62■□□□□ 0.73
SCN2BO60939 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SCN2BO60939 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SCN2BO60939 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.62■□□□□ 0.73
SCN2BO60939 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SCN2BO60939 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SCN2BO60939 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SCN2BO60939 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.62■□□□□ 0.73
SCN2BO60939 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SCN2BO60939 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
SCN2BO60939 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
SCN2BO60939 AP004607.4-201ENST00000530158 1459 ntBASIC19.61■□□□□ 0.73
SCN2BO60939 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
SCN2BO60939 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SCN2BO60939 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SCN2BO60939 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SCN2BO60939 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
SCN2BO60939 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SCN2BO60939 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
SCN2BO60939 MTURN-203ENST00000409688 843 ntTSL 2 BASIC19.61■□□□□ 0.73
SCN2BO60939 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SCN2BO60939 RALB-208ENST00000631312 311 ntTSL 5 BASIC19.61■□□□□ 0.73
SCN2BO60939 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
SCN2BO60939 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
SCN2BO60939 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SCN2BO60939 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.61■□□□□ 0.73
SCN2BO60939 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.61■□□□□ 0.73
SCN2BO60939 AC011484.1-201ENST00000377652 1995 ntBASIC19.61■□□□□ 0.73
SCN2BO60939 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms