Protein–RNA interactions for Protein: O60931

CTNS, Cystinosin, humanhuman

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNSO60931 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CTNSO60931 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CTNSO60931 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.46■□□□□ 0.71
CTNSO60931 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CTNSO60931 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CTNSO60931 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
CTNSO60931 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CTNSO60931 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CTNSO60931 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
CTNSO60931 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CTNSO60931 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CTNSO60931 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
CTNSO60931 AL162412.1-201ENST00000567129 965 ntBASIC19.46■□□□□ 0.71
CTNSO60931 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC19.46■□□□□ 0.71
CTNSO60931 RAP2CP1-201ENST00000605103 478 ntBASIC19.46■□□□□ 0.71
CTNSO60931 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.46■□□□□ 0.71
CTNSO60931 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CTNSO60931 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CTNSO60931 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.46■□□□□ 0.71
CTNSO60931 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
CTNSO60931 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CTNSO60931 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CTNSO60931 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CTNSO60931 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CTNSO60931 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.45■□□□□ 0.7
CTNSO60931 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.45■□□□□ 0.7
CTNSO60931 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CTNSO60931 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.45■□□□□ 0.7
CTNSO60931 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CTNSO60931 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.45■□□□□ 0.7
CTNSO60931 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.45■□□□□ 0.7
CTNSO60931 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.45■□□□□ 0.7
CTNSO60931 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.45■□□□□ 0.7
CTNSO60931 MAZ-216ENST00000616501 991 ntTSL 5 BASIC19.45■□□□□ 0.7
CTNSO60931 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CTNSO60931 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CTNSO60931 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.44■□□□□ 0.7
CTNSO60931 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.44■□□□□ 0.7
CTNSO60931 AF106564.1-201ENST00000607058 2553 ntBASIC19.44■□□□□ 0.7
CTNSO60931 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CTNSO60931 AC068338.2-201ENST00000563278 1430 ntBASIC19.44■□□□□ 0.7
CTNSO60931 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTNSO60931 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.44■□□□□ 0.7
CTNSO60931 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTNSO60931 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CTNSO60931 CDV3P1-201ENST00000471403 739 ntBASIC19.44■□□□□ 0.7
CTNSO60931 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CTNSO60931 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC19.44■□□□□ 0.7
CTNSO60931 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CTNSO60931 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CTNSO60931 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CTNSO60931 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.44■□□□□ 0.7
CTNSO60931 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
CTNSO60931 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.44■□□□□ 0.7
CTNSO60931 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTNSO60931 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CTNSO60931 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CTNSO60931 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CTNSO60931 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.43■□□□□ 0.7
CTNSO60931 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CTNSO60931 AC116050.2-201ENST00000612102 1779 ntBASIC19.43■□□□□ 0.7
CTNSO60931 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CTNSO60931 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CTNSO60931 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CTNSO60931 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.43■□□□□ 0.7
CTNSO60931 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.43■□□□□ 0.7
CTNSO60931 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CTNSO60931 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
CTNSO60931 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CTNSO60931 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CTNSO60931 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.43■□□□□ 0.7
CTNSO60931 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.42■□□□□ 0.7
CTNSO60931 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
CTNSO60931 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CTNSO60931 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CTNSO60931 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CTNSO60931 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
CTNSO60931 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.42■□□□□ 0.7
CTNSO60931 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CTNSO60931 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.42■□□□□ 0.7
CTNSO60931 AC005181.1-201ENST00000604782 1256 ntBASIC19.42■□□□□ 0.7
CTNSO60931 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CTNSO60931 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CTNSO60931 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.42■□□□□ 0.7
CTNSO60931 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.42■□□□□ 0.7
CTNSO60931 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CTNSO60931 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CTNSO60931 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CTNSO60931 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CTNSO60931 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
CTNSO60931 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CTNSO60931 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CTNSO60931 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.41■□□□□ 0.7
CTNSO60931 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CTNSO60931 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.41■□□□□ 0.7
CTNSO60931 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
CTNSO60931 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CTNSO60931 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC19.41■□□□□ 0.7
CTNSO60931 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CTNSO60931 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms