Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LCMT2O60294 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.85■□□□□ 0.77
LCMT2O60294 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.85■□□□□ 0.77
LCMT2O60294 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LCMT2O60294 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
LCMT2O60294 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LCMT2O60294 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.85■□□□□ 0.77
LCMT2O60294 CNN2P6-201ENST00000439038 900 ntBASIC19.85■□□□□ 0.77
LCMT2O60294 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.85■□□□□ 0.77
LCMT2O60294 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.85■□□□□ 0.77
LCMT2O60294 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
LCMT2O60294 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LCMT2O60294 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
LCMT2O60294 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LCMT2O60294 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LCMT2O60294 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.85■□□□□ 0.77
LCMT2O60294 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.85■□□□□ 0.77
LCMT2O60294 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.85■□□□□ 0.77
LCMT2O60294 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LCMT2O60294 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.84■□□□□ 0.77
LCMT2O60294 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LCMT2O60294 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LCMT2O60294 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.84■□□□□ 0.77
LCMT2O60294 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LCMT2O60294 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
LCMT2O60294 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LCMT2O60294 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
LCMT2O60294 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.84■□□□□ 0.77
LCMT2O60294 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LCMT2O60294 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
LCMT2O60294 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
LCMT2O60294 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LCMT2O60294 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LCMT2O60294 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
LCMT2O60294 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
LCMT2O60294 PLK5-205ENST00000642079 1969 ntBASIC19.83■□□□□ 0.77
LCMT2O60294 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LCMT2O60294 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.83■□□□□ 0.77
LCMT2O60294 CDCA4P2-201ENST00000441182 718 ntBASIC19.83■□□□□ 0.77
LCMT2O60294 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.83■□□□□ 0.77
LCMT2O60294 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.83■□□□□ 0.77
LCMT2O60294 AC073111.5-205ENST00000641717 521 ntBASIC19.83■□□□□ 0.77
LCMT2O60294 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
LCMT2O60294 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
LCMT2O60294 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
LCMT2O60294 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.76
LCMT2O60294 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.83■□□□□ 0.76
LCMT2O60294 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
LCMT2O60294 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
LCMT2O60294 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
LCMT2O60294 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LCMT2O60294 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LCMT2O60294 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LCMT2O60294 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LCMT2O60294 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LCMT2O60294 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.82■□□□□ 0.76
LCMT2O60294 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC19.82■□□□□ 0.76
LCMT2O60294 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.82■□□□□ 0.76
LCMT2O60294 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LCMT2O60294 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.82■□□□□ 0.76
LCMT2O60294 AC121338.2-201ENST00000622535 1744 ntBASIC19.82■□□□□ 0.76
LCMT2O60294 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
LCMT2O60294 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
LCMT2O60294 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LCMT2O60294 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
LCMT2O60294 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
LCMT2O60294 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LCMT2O60294 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
LCMT2O60294 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
LCMT2O60294 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19.81■□□□□ 0.76
LCMT2O60294 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.81■□□□□ 0.76
LCMT2O60294 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LCMT2O60294 MAZ-216ENST00000616501 991 ntTSL 5 BASIC19.81■□□□□ 0.76
LCMT2O60294 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.81■□□□□ 0.76
LCMT2O60294 AC013268.1-206ENST00000638368 961 ntBASIC19.81■□□□□ 0.76
LCMT2O60294 AC112229.1-201ENST00000639295 961 ntBASIC19.81■□□□□ 0.76
LCMT2O60294 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LCMT2O60294 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LCMT2O60294 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
LCMT2O60294 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.81■□□□□ 0.76
LCMT2O60294 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.8■□□□□ 0.76
LCMT2O60294 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LCMT2O60294 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.8■□□□□ 0.76
LCMT2O60294 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LCMT2O60294 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.8■□□□□ 0.76
LCMT2O60294 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.8■□□□□ 0.76
LCMT2O60294 AC231657.2-201ENST00000624556 255 ntBASIC19.8■□□□□ 0.76
LCMT2O60294 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.8■□□□□ 0.76
LCMT2O60294 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LCMT2O60294 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
LCMT2O60294 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LCMT2O60294 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.8■□□□□ 0.76
LCMT2O60294 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LCMT2O60294 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
LCMT2O60294 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
LCMT2O60294 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LCMT2O60294 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.79■□□□□ 0.76
LCMT2O60294 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LCMT2O60294 AC068338.2-201ENST00000563278 1430 ntBASIC19.79■□□□□ 0.76
LCMT2O60294 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms