Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PHF1O43189 TUB-203ENST00000534099 1759 ntTSL 2 BASIC17.84■□□□□ 0.45
PHF1O43189 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PHF1O43189 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PHF1O43189 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PHF1O43189 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PHF1O43189 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PHF1O43189 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
PHF1O43189 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PHF1O43189 KRT19P1-201ENST00000405746 1186 ntBASIC17.84■□□□□ 0.45
PHF1O43189 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC17.84■□□□□ 0.45
PHF1O43189 MDK-213ENST00000617138 635 ntTSL 2 BASIC17.84■□□□□ 0.45
PHF1O43189 GAMT-205ENST00000640762 751 ntTSL 5 BASIC17.84■□□□□ 0.45
PHF1O43189 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PHF1O43189 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PHF1O43189 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PHF1O43189 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PHF1O43189 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PHF1O43189 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
PHF1O43189 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PHF1O43189 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC17.83■□□□□ 0.45
PHF1O43189 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
PHF1O43189 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC17.83■□□□□ 0.45
PHF1O43189 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
PHF1O43189 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PHF1O43189 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
PHF1O43189 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PHF1O43189 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PHF1O43189 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC17.83■□□□□ 0.44
PHF1O43189 ARL16-209ENST00000573715 763 ntTSL 3 BASIC17.83■□□□□ 0.44
PHF1O43189 ARL16-211ENST00000576135 694 ntTSL 3 BASIC17.83■□□□□ 0.44
PHF1O43189 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC17.83■□□□□ 0.44
PHF1O43189 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
PHF1O43189 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC17.83■□□□□ 0.44
PHF1O43189 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC17.82■□□□□ 0.44
PHF1O43189 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
PHF1O43189 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PHF1O43189 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PHF1O43189 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.82■□□□□ 0.44
PHF1O43189 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PHF1O43189 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PHF1O43189 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC17.82■□□□□ 0.44
PHF1O43189 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PHF1O43189 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC17.82■□□□□ 0.44
PHF1O43189 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PHF1O43189 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
PHF1O43189 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PHF1O43189 AF106564.1-201ENST00000607058 2553 ntBASIC17.82■□□□□ 0.44
PHF1O43189 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC17.82■□□□□ 0.44
PHF1O43189 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC17.82■□□□□ 0.44
PHF1O43189 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC17.82■□□□□ 0.44
PHF1O43189 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC17.82■□□□□ 0.44
PHF1O43189 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC17.82■□□□□ 0.44
PHF1O43189 MIR4651-201ENST00000582622 73 ntBASIC17.82■□□□□ 0.44
PHF1O43189 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PHF1O43189 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC17.82■□□□□ 0.44
PHF1O43189 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PHF1O43189 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PHF1O43189 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC17.82■□□□□ 0.44
PHF1O43189 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PHF1O43189 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC17.81■□□□□ 0.44
PHF1O43189 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PHF1O43189 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PHF1O43189 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PHF1O43189 KRT18P11-201ENST00000435214 1283 ntBASIC17.81■□□□□ 0.44
PHF1O43189 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC17.81■□□□□ 0.44
PHF1O43189 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC17.81■□□□□ 0.44
PHF1O43189 CPT2-209ENST00000636935 803 ntTSL 5 BASIC17.81■□□□□ 0.44
PHF1O43189 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PHF1O43189 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PHF1O43189 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC17.81■□□□□ 0.44
PHF1O43189 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
PHF1O43189 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PHF1O43189 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PHF1O43189 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PHF1O43189 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PHF1O43189 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.8■□□□□ 0.44
PHF1O43189 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PHF1O43189 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.8■□□□□ 0.44
PHF1O43189 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PHF1O43189 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PHF1O43189 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC17.8■□□□□ 0.44
PHF1O43189 SPI1-203ENST00000533030 661 ntTSL 2 BASIC17.8■□□□□ 0.44
PHF1O43189 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PHF1O43189 AL121832.2-201ENST00000610979 668 ntBASIC17.8■□□□□ 0.44
PHF1O43189 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PHF1O43189 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC17.8■□□□□ 0.44
PHF1O43189 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
PHF1O43189 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PHF1O43189 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PHF1O43189 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PHF1O43189 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PHF1O43189 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PHF1O43189 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PHF1O43189 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PHF1O43189 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC17.79■□□□□ 0.44
PHF1O43189 FEM1AP4-201ENST00000443167 1987 ntBASIC17.79■□□□□ 0.44
PHF1O43189 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC17.79■□□□□ 0.44
PHF1O43189 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC17.79■□□□□ 0.44
PHF1O43189 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms