Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
NDUFA1O15239 ERF-202ENST00000440177 2032 ntTSL 2 BASIC14.15□□□□□ -0.14
NDUFA1O15239 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NDUFA1O15239 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NDUFA1O15239 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
NDUFA1O15239 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC14.15□□□□□ -0.14
NDUFA1O15239 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC14.15□□□□□ -0.14
NDUFA1O15239 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC14.15□□□□□ -0.14
NDUFA1O15239 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
NDUFA1O15239 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
NDUFA1O15239 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC14.15□□□□□ -0.14
NDUFA1O15239 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC14.15□□□□□ -0.14
NDUFA1O15239 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NDUFA1O15239 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC14.15□□□□□ -0.14
NDUFA1O15239 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NDUFA1O15239 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC14.15□□□□□ -0.14
NDUFA1O15239 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NDUFA1O15239 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NDUFA1O15239 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NDUFA1O15239 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NDUFA1O15239 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
NDUFA1O15239 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NDUFA1O15239 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NDUFA1O15239 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
NDUFA1O15239 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NDUFA1O15239 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC14.15□□□□□ -0.14
NDUFA1O15239 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC14.15□□□□□ -0.14
NDUFA1O15239 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
NDUFA1O15239 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
NDUFA1O15239 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NDUFA1O15239 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
NDUFA1O15239 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
NDUFA1O15239 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
NDUFA1O15239 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NDUFA1O15239 PCDHAC2-203ENST00000615316 3011 ntBASIC14.14□□□□□ -0.15
NDUFA1O15239 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NDUFA1O15239 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NDUFA1O15239 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC14.14□□□□□ -0.15
NDUFA1O15239 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC14.14□□□□□ -0.15
NDUFA1O15239 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NDUFA1O15239 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NDUFA1O15239 SRR-208ENST00000576848 588 ntTSL 4 BASIC14.14□□□□□ -0.15
NDUFA1O15239 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
NDUFA1O15239 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
NDUFA1O15239 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC14.14□□□□□ -0.15
NDUFA1O15239 PLK5-205ENST00000642079 1969 ntBASIC14.14□□□□□ -0.15
NDUFA1O15239 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NDUFA1O15239 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NDUFA1O15239 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
NDUFA1O15239 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NDUFA1O15239 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
NDUFA1O15239 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
NDUFA1O15239 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NDUFA1O15239 AC027702.1-201ENST00000563810 1770 ntBASIC14.14□□□□□ -0.15
NDUFA1O15239 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
NDUFA1O15239 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NDUFA1O15239 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
NDUFA1O15239 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
NDUFA1O15239 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
NDUFA1O15239 AC020907.5-201ENST00000624372 1936 ntBASIC14.13□□□□□ -0.15
NDUFA1O15239 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC14.13□□□□□ -0.15
NDUFA1O15239 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NDUFA1O15239 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC14.13□□□□□ -0.15
NDUFA1O15239 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC14.13□□□□□ -0.15
NDUFA1O15239 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NDUFA1O15239 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
NDUFA1O15239 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
NDUFA1O15239 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
NDUFA1O15239 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
NDUFA1O15239 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NDUFA1O15239 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
NDUFA1O15239 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
NDUFA1O15239 AL138724.1-201ENST00000606771 1088 ntBASIC14.13□□□□□ -0.15
NDUFA1O15239 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
NDUFA1O15239 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
NDUFA1O15239 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC14.13□□□□□ -0.15
NDUFA1O15239 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
NDUFA1O15239 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NDUFA1O15239 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NDUFA1O15239 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NDUFA1O15239 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NDUFA1O15239 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
NDUFA1O15239 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC14.13□□□□□ -0.15
NDUFA1O15239 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
NDUFA1O15239 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
NDUFA1O15239 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC14.13□□□□□ -0.15
NDUFA1O15239 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC14.13□□□□□ -0.15
NDUFA1O15239 SYT6-210ENST00000641643 1587 ntBASIC14.13□□□□□ -0.15
NDUFA1O15239 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NDUFA1O15239 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
NDUFA1O15239 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NDUFA1O15239 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC14.12□□□□□ -0.15
NDUFA1O15239 BID-204ENST00000399767 2129 ntTSL 2 BASIC14.12□□□□□ -0.15
NDUFA1O15239 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NDUFA1O15239 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
NDUFA1O15239 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NDUFA1O15239 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NDUFA1O15239 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NDUFA1O15239 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
NDUFA1O15239 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms