Protein–RNA interactions for Protein: O15232

MATN3, Matrilin-3, humanhuman

Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MATN3O15232 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
MATN3O15232 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21.1■□□□□ 0.97
MATN3O15232 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
MATN3O15232 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
MATN3O15232 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC21.1■□□□□ 0.97
MATN3O15232 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
MATN3O15232 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
MATN3O15232 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
MATN3O15232 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
MATN3O15232 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
MATN3O15232 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
MATN3O15232 PARL-206ENST00000435888 1098 ntTSL 5 BASIC21.1■□□□□ 0.97
MATN3O15232 TERF1P5-201ENST00000477545 1207 ntBASIC21.1■□□□□ 0.97
MATN3O15232 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21.1■□□□□ 0.97
MATN3O15232 CD44-222ENST00000526025 1052 ntTSL 2 BASIC21.1■□□□□ 0.97
MATN3O15232 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
MATN3O15232 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.1■□□□□ 0.97
MATN3O15232 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC21.1■□□□□ 0.97
MATN3O15232 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
MATN3O15232 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
MATN3O15232 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
MATN3O15232 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
MATN3O15232 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
MATN3O15232 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
MATN3O15232 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.09■□□□□ 0.97
MATN3O15232 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
MATN3O15232 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
MATN3O15232 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
MATN3O15232 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC21.09■□□□□ 0.97
MATN3O15232 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC21.09■□□□□ 0.97
MATN3O15232 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
MATN3O15232 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC21.09■□□□□ 0.97
MATN3O15232 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
MATN3O15232 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
MATN3O15232 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC21.09■□□□□ 0.97
MATN3O15232 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
MATN3O15232 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
MATN3O15232 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC21.09■□□□□ 0.97
MATN3O15232 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC21.09■□□□□ 0.97
MATN3O15232 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC21.09■□□□□ 0.97
MATN3O15232 MFSD11-216ENST00000590393 1141 ntBASIC21.09■□□□□ 0.97
MATN3O15232 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC21.09■□□□□ 0.97
MATN3O15232 AC116050.2-201ENST00000612102 1779 ntBASIC21.09■□□□□ 0.97
MATN3O15232 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
MATN3O15232 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
MATN3O15232 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
MATN3O15232 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
MATN3O15232 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
MATN3O15232 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
MATN3O15232 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
MATN3O15232 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
MATN3O15232 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC21.08■□□□□ 0.97
MATN3O15232 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
MATN3O15232 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC21.08■□□□□ 0.97
MATN3O15232 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC21.08■□□□□ 0.97
MATN3O15232 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
MATN3O15232 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
MATN3O15232 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
MATN3O15232 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC21.08■□□□□ 0.96
MATN3O15232 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
MATN3O15232 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC21.08■□□□□ 0.96
MATN3O15232 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC21.07■□□□□ 0.96
MATN3O15232 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
MATN3O15232 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
MATN3O15232 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
MATN3O15232 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
MATN3O15232 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
MATN3O15232 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC21.07■□□□□ 0.96
MATN3O15232 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
MATN3O15232 UQCRFS1P1-201ENST00000435169 820 ntBASIC21.07■□□□□ 0.96
MATN3O15232 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC21.07■□□□□ 0.96
MATN3O15232 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC21.07■□□□□ 0.96
MATN3O15232 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
MATN3O15232 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.07■□□□□ 0.96
MATN3O15232 AC011767.1-201ENST00000617410 1153 ntBASIC21.07■□□□□ 0.96
MATN3O15232 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
MATN3O15232 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
MATN3O15232 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC21.06■□□□□ 0.96
MATN3O15232 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
MATN3O15232 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC21.06■□□□□ 0.96
MATN3O15232 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
MATN3O15232 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
MATN3O15232 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
MATN3O15232 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC21.06■□□□□ 0.96
MATN3O15232 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
MATN3O15232 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
MATN3O15232 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.06■□□□□ 0.96
MATN3O15232 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC21.06■□□□□ 0.96
MATN3O15232 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
MATN3O15232 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
MATN3O15232 GAS2L1P2-201ENST00000436355 1356 ntBASIC21.06■□□□□ 0.96
MATN3O15232 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
MATN3O15232 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
MATN3O15232 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
MATN3O15232 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
MATN3O15232 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
MATN3O15232 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC21.05■□□□□ 0.96
MATN3O15232 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC21.05■□□□□ 0.96
MATN3O15232 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
MATN3O15232 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms