Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
AP3D1O14617 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
AP3D1O14617 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
AP3D1O14617 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.32■□□□□ 0.68
AP3D1O14617 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
AP3D1O14617 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
AP3D1O14617 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
AP3D1O14617 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
AP3D1O14617 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.32■□□□□ 0.68
AP3D1O14617 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
AP3D1O14617 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.32■□□□□ 0.68
AP3D1O14617 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
AP3D1O14617 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.31■□□□□ 0.68
AP3D1O14617 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
AP3D1O14617 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
AP3D1O14617 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
AP3D1O14617 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
AP3D1O14617 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
AP3D1O14617 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
AP3D1O14617 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.31■□□□□ 0.68
AP3D1O14617 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.31■□□□□ 0.68
AP3D1O14617 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
AP3D1O14617 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
AP3D1O14617 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
AP3D1O14617 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.31■□□□□ 0.68
AP3D1O14617 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.31■□□□□ 0.68
AP3D1O14617 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
AP3D1O14617 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
AP3D1O14617 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
AP3D1O14617 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
AP3D1O14617 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
AP3D1O14617 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
AP3D1O14617 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.3■□□□□ 0.68
AP3D1O14617 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
AP3D1O14617 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
AP3D1O14617 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
AP3D1O14617 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
AP3D1O14617 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.3■□□□□ 0.68
AP3D1O14617 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
AP3D1O14617 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.3■□□□□ 0.68
AP3D1O14617 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
AP3D1O14617 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
AP3D1O14617 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.3■□□□□ 0.68
AP3D1O14617 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.3■□□□□ 0.68
AP3D1O14617 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
AP3D1O14617 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
AP3D1O14617 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
AP3D1O14617 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.29■□□□□ 0.68
AP3D1O14617 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
AP3D1O14617 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
AP3D1O14617 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
AP3D1O14617 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.29■□□□□ 0.68
AP3D1O14617 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
AP3D1O14617 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
AP3D1O14617 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
AP3D1O14617 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
AP3D1O14617 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
AP3D1O14617 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
AP3D1O14617 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
AP3D1O14617 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.29■□□□□ 0.68
AP3D1O14617 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.29■□□□□ 0.68
AP3D1O14617 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
AP3D1O14617 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
AP3D1O14617 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
AP3D1O14617 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
AP3D1O14617 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
AP3D1O14617 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.29■□□□□ 0.68
AP3D1O14617 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
AP3D1O14617 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
AP3D1O14617 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
AP3D1O14617 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.28■□□□□ 0.68
AP3D1O14617 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.28■□□□□ 0.68
AP3D1O14617 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
AP3D1O14617 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.28■□□□□ 0.68
AP3D1O14617 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.28■□□□□ 0.68
AP3D1O14617 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
AP3D1O14617 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.28■□□□□ 0.68
AP3D1O14617 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
AP3D1O14617 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
AP3D1O14617 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
AP3D1O14617 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.27■□□□□ 0.68
AP3D1O14617 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
AP3D1O14617 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
AP3D1O14617 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
AP3D1O14617 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
AP3D1O14617 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
AP3D1O14617 ZNRF2P3-201ENST00000424200 374 ntBASIC19.27■□□□□ 0.68
AP3D1O14617 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
AP3D1O14617 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
AP3D1O14617 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.27■□□□□ 0.68
AP3D1O14617 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.27■□□□□ 0.68
AP3D1O14617 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.27■□□□□ 0.68
AP3D1O14617 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
AP3D1O14617 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.27■□□□□ 0.68
AP3D1O14617 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
AP3D1O14617 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
AP3D1O14617 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
AP3D1O14617 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
AP3D1O14617 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
AP3D1O14617 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms