Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC35.99■■■■□ 3.35
CUX2O14529 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC35.99■■■■□ 3.35
CUX2O14529 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC35.99■■■■□ 3.35
CUX2O14529 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC35.99■■■■□ 3.35
CUX2O14529 LINC01568-207ENST00000641790 1380 ntBASIC35.99■■■■□ 3.35
CUX2O14529 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC35.99■■■■□ 3.35
CUX2O14529 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC35.99■■■■□ 3.35
CUX2O14529 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC35.99■■■■□ 3.35
CUX2O14529 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC35.99■■■■□ 3.35
CUX2O14529 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC35.99■■■■□ 3.35
CUX2O14529 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC35.99■■■■□ 3.35
CUX2O14529 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC35.99■■■■□ 3.35
CUX2O14529 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC35.98■■■■□ 3.35
CUX2O14529 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC35.98■■■■□ 3.35
CUX2O14529 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC35.98■■■■□ 3.35
CUX2O14529 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC35.98■■■■□ 3.35
CUX2O14529 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC35.98■■■■□ 3.35
CUX2O14529 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC35.98■■■■□ 3.35
CUX2O14529 MCRIP2P1-201ENST00000394346 511 ntBASIC35.98■■■■□ 3.35
CUX2O14529 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC35.98■■■■□ 3.35
CUX2O14529 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC35.97■■■■□ 3.35
CUX2O14529 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC35.97■■■■□ 3.35
CUX2O14529 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC35.97■■■■□ 3.35
CUX2O14529 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC35.97■■■■□ 3.35
CUX2O14529 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC35.97■■■■□ 3.35
CUX2O14529 RBM17P1-201ENST00000453646 1190 ntBASIC35.97■■■■□ 3.35
CUX2O14529 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC35.97■■■■□ 3.35
CUX2O14529 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC35.97■■■■□ 3.35
CUX2O14529 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC35.97■■■■□ 3.35
CUX2O14529 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC35.97■■■■□ 3.35
CUX2O14529 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC35.97■■■■□ 3.35
CUX2O14529 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC35.96■■■■□ 3.35
CUX2O14529 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC35.96■■■■□ 3.35
CUX2O14529 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC35.96■■■■□ 3.35
CUX2O14529 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC35.96■■■■□ 3.35
CUX2O14529 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC35.96■■■■□ 3.35
CUX2O14529 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC35.96■■■■□ 3.35
CUX2O14529 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC35.95■■■■□ 3.35
CUX2O14529 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC35.95■■■■□ 3.35
CUX2O14529 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC35.95■■■■□ 3.35
CUX2O14529 AL450487.1-201ENST00000426799 995 ntBASIC35.95■■■■□ 3.35
CUX2O14529 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC35.95■■■■□ 3.35
CUX2O14529 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC35.95■■■■□ 3.35
CUX2O14529 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC35.95■■■■□ 3.35
CUX2O14529 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC35.95■■■■□ 3.34
CUX2O14529 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC35.95■■■■□ 3.34
CUX2O14529 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC35.94■■■■□ 3.34
CUX2O14529 AC006011.2-201ENST00000621313 1158 ntBASIC35.94■■■■□ 3.34
CUX2O14529 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC35.94■■■■□ 3.34
CUX2O14529 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC35.94■■■■□ 3.34
CUX2O14529 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC35.93■■■■□ 3.34
CUX2O14529 GGT1-206ENST00000404223 952 ntTSL 2 BASIC35.93■■■■□ 3.34
CUX2O14529 ISCU-203ENST00000431221 799 ntTSL 2 BASIC35.93■■■■□ 3.34
CUX2O14529 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC35.93■■■■□ 3.34
CUX2O14529 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC35.93■■■■□ 3.34
CUX2O14529 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC35.93■■■■□ 3.34
CUX2O14529 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC35.93■■■■□ 3.34
CUX2O14529 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC35.93■■■■□ 3.34
CUX2O14529 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC35.93■■■■□ 3.34
CUX2O14529 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC35.93■■■■□ 3.34
CUX2O14529 AC079598.2-202ENST00000546624 1451 ntBASIC35.93■■■■□ 3.34
CUX2O14529 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC35.92■■■■□ 3.34
CUX2O14529 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC35.92■■■■□ 3.34
CUX2O14529 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC35.92■■■■□ 3.34
CUX2O14529 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC35.92■■■■□ 3.34
CUX2O14529 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC35.92■■■■□ 3.34
CUX2O14529 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC35.92■■■■□ 3.34
CUX2O14529 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC35.92■■■■□ 3.34
CUX2O14529 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC35.92■■■■□ 3.34
CUX2O14529 AL034346.1-201ENST00000568244 1277 ntBASIC35.92■■■■□ 3.34
CUX2O14529 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC35.92■■■■□ 3.34
CUX2O14529 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC35.91■■■■□ 3.34
CUX2O14529 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC35.91■■■■□ 3.34
CUX2O14529 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC35.91■■■■□ 3.34
CUX2O14529 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC35.91■■■■□ 3.34
CUX2O14529 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC35.91■■■■□ 3.34
CUX2O14529 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC35.91■■■■□ 3.34
CUX2O14529 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC35.9■■■■□ 3.34
CUX2O14529 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC35.9■■■■□ 3.34
CUX2O14529 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC35.9■■■■□ 3.34
CUX2O14529 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC35.9■■■■□ 3.34
CUX2O14529 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC35.9■■■■□ 3.34
CUX2O14529 AC009947.2-201ENST00000444014 672 ntBASIC35.9■■■■□ 3.34
CUX2O14529 THEM4-205ENST00000489410 643 ntTSL 2 BASIC35.9■■■■□ 3.34
CUX2O14529 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC35.9■■■■□ 3.34
CUX2O14529 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC35.9■■■■□ 3.34
CUX2O14529 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC35.9■■■■□ 3.34
CUX2O14529 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC35.9■■■■□ 3.34
CUX2O14529 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC35.9■■■■□ 3.34
CUX2O14529 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC35.9■■■■□ 3.34
CUX2O14529 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC35.9■■■■□ 3.34
CUX2O14529 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC35.9■■■■□ 3.34
CUX2O14529 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC35.89■■■■□ 3.34
CUX2O14529 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC35.89■■■■□ 3.34
CUX2O14529 KRT18P22-201ENST00000402024 1347 ntBASIC35.89■■■■□ 3.34
CUX2O14529 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC35.89■■■■□ 3.34
CUX2O14529 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC35.89■■■■□ 3.34
CUX2O14529 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC35.89■■■■□ 3.34
CUX2O14529 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC35.89■■■■□ 3.34
CUX2O14529 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC35.89■■■■□ 3.34
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms