Protein–RNA interactions for Protein: O00299

CLIC1, Chloride intracellular channel protein 1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1O00299 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CLIC1O00299 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.55■□□□□ 0.72
CLIC1O00299 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.55■□□□□ 0.72
CLIC1O00299 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLIC1O00299 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.54■□□□□ 0.72
CLIC1O00299 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.54■□□□□ 0.72
CLIC1O00299 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLIC1O00299 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.54■□□□□ 0.72
CLIC1O00299 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
CLIC1O00299 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
CLIC1O00299 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLIC1O00299 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CLIC1O00299 PEMT-206ENST00000435340 960 ntTSL 5 BASIC19.54■□□□□ 0.72
CLIC1O00299 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.54■□□□□ 0.72
CLIC1O00299 AC053503.5-201ENST00000601508 636 ntBASIC19.54■□□□□ 0.72
CLIC1O00299 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLIC1O00299 AC020907.5-201ENST00000624372 1936 ntBASIC19.54■□□□□ 0.72
CLIC1O00299 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
CLIC1O00299 RASA4CP-201ENST00000424092 1398 ntBASIC19.54■□□□□ 0.72
CLIC1O00299 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLIC1O00299 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.54■□□□□ 0.72
CLIC1O00299 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLIC1O00299 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLIC1O00299 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLIC1O00299 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLIC1O00299 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CLIC1O00299 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.53■□□□□ 0.72
CLIC1O00299 EEF1DP3-203ENST00000566025 782 ntBASIC19.53■□□□□ 0.72
CLIC1O00299 AL355001.2-201ENST00000620617 1191 ntBASIC19.53■□□□□ 0.72
CLIC1O00299 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.53■□□□□ 0.72
CLIC1O00299 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLIC1O00299 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.53■□□□□ 0.72
CLIC1O00299 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
CLIC1O00299 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLIC1O00299 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLIC1O00299 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
CLIC1O00299 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.52■□□□□ 0.72
CLIC1O00299 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CLIC1O00299 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.52■□□□□ 0.72
CLIC1O00299 FP700111.2-201ENST00000619190 1892 ntBASIC19.52■□□□□ 0.72
CLIC1O00299 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
CLIC1O00299 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
CLIC1O00299 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.52■□□□□ 0.72
CLIC1O00299 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
CLIC1O00299 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
CLIC1O00299 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CLIC1O00299 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.52■□□□□ 0.72
CLIC1O00299 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLIC1O00299 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
CLIC1O00299 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.52■□□□□ 0.72
CLIC1O00299 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLIC1O00299 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLIC1O00299 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CLIC1O00299 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CLIC1O00299 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.52■□□□□ 0.71
CLIC1O00299 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLIC1O00299 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.51■□□□□ 0.71
CLIC1O00299 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.51■□□□□ 0.71
CLIC1O00299 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLIC1O00299 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CLIC1O00299 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLIC1O00299 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.51■□□□□ 0.71
CLIC1O00299 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLIC1O00299 MIR939-201ENST00000401314 82 ntBASIC19.51■□□□□ 0.71
CLIC1O00299 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC19.51■□□□□ 0.71
CLIC1O00299 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.51■□□□□ 0.71
CLIC1O00299 AP004607.4-201ENST00000530158 1459 ntBASIC19.51■□□□□ 0.71
CLIC1O00299 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.51■□□□□ 0.71
CLIC1O00299 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLIC1O00299 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.51■□□□□ 0.71
CLIC1O00299 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLIC1O00299 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLIC1O00299 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLIC1O00299 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.51■□□□□ 0.71
CLIC1O00299 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLIC1O00299 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CLIC1O00299 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.51■□□□□ 0.71
CLIC1O00299 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLIC1O00299 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CLIC1O00299 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLIC1O00299 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLIC1O00299 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
CLIC1O00299 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.5■□□□□ 0.71
CLIC1O00299 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLIC1O00299 AC061975.6-201ENST00000579045 1553 ntBASIC19.5■□□□□ 0.71
CLIC1O00299 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC19.5■□□□□ 0.71
CLIC1O00299 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CLIC1O00299 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.5■□□□□ 0.71
CLIC1O00299 AF213884.3-201ENST00000563833 479 ntBASIC19.5■□□□□ 0.71
CLIC1O00299 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.5■□□□□ 0.71
CLIC1O00299 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLIC1O00299 AL391422.3-201ENST00000603791 2761 ntBASIC19.5■□□□□ 0.71
CLIC1O00299 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.5■□□□□ 0.71
CLIC1O00299 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLIC1O00299 AC011484.1-201ENST00000377652 1995 ntBASIC19.5■□□□□ 0.71
CLIC1O00299 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
CLIC1O00299 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLIC1O00299 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
CLIC1O00299 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLIC1O00299 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms