Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TMX2-CTNND1H3BSU7 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TMX2-CTNND1H3BSU7 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
TMX2-CTNND1H3BSU7 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
TMX2-CTNND1H3BSU7 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
TMX2-CTNND1H3BSU7 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
TMX2-CTNND1H3BSU7 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
TMX2-CTNND1H3BSU7 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TMX2-CTNND1H3BSU7 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.31■□□□□ 0.84
TMX2-CTNND1H3BSU7 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.31■□□□□ 0.84
TMX2-CTNND1H3BSU7 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.31■□□□□ 0.84
TMX2-CTNND1H3BSU7 AL162412.1-201ENST00000567129 965 ntBASIC20.31■□□□□ 0.84
TMX2-CTNND1H3BSU7 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.31■□□□□ 0.84
TMX2-CTNND1H3BSU7 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
TMX2-CTNND1H3BSU7 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
TMX2-CTNND1H3BSU7 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
TMX2-CTNND1H3BSU7 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
TMX2-CTNND1H3BSU7 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
TMX2-CTNND1H3BSU7 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
TMX2-CTNND1H3BSU7 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TMX2-CTNND1H3BSU7 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
TMX2-CTNND1H3BSU7 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TMX2-CTNND1H3BSU7 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.3■□□□□ 0.84
TMX2-CTNND1H3BSU7 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TMX2-CTNND1H3BSU7 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
TMX2-CTNND1H3BSU7 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
TMX2-CTNND1H3BSU7 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TMX2-CTNND1H3BSU7 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
TMX2-CTNND1H3BSU7 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
TMX2-CTNND1H3BSU7 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
TMX2-CTNND1H3BSU7 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
TMX2-CTNND1H3BSU7 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
TMX2-CTNND1H3BSU7 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.3■□□□□ 0.84
TMX2-CTNND1H3BSU7 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
TMX2-CTNND1H3BSU7 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TMX2-CTNND1H3BSU7 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.3■□□□□ 0.84
TMX2-CTNND1H3BSU7 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TMX2-CTNND1H3BSU7 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TMX2-CTNND1H3BSU7 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
TMX2-CTNND1H3BSU7 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
TMX2-CTNND1H3BSU7 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
TMX2-CTNND1H3BSU7 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TMX2-CTNND1H3BSU7 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TMX2-CTNND1H3BSU7 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
TMX2-CTNND1H3BSU7 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TMX2-CTNND1H3BSU7 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TMX2-CTNND1H3BSU7 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
TMX2-CTNND1H3BSU7 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
TMX2-CTNND1H3BSU7 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TMX2-CTNND1H3BSU7 POU5F1P3-201ENST00000428824 1078 ntBASIC20.29■□□□□ 0.84
TMX2-CTNND1H3BSU7 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.29■□□□□ 0.84
TMX2-CTNND1H3BSU7 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.29■□□□□ 0.84
TMX2-CTNND1H3BSU7 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.29■□□□□ 0.84
TMX2-CTNND1H3BSU7 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.29■□□□□ 0.84
TMX2-CTNND1H3BSU7 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.29■□□□□ 0.84
TMX2-CTNND1H3BSU7 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.29■□□□□ 0.84
TMX2-CTNND1H3BSU7 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.29■□□□□ 0.84
TMX2-CTNND1H3BSU7 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TMX2-CTNND1H3BSU7 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TMX2-CTNND1H3BSU7 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.29■□□□□ 0.84
TMX2-CTNND1H3BSU7 MIR4651-201ENST00000582622 73 ntBASIC20.29■□□□□ 0.84
TMX2-CTNND1H3BSU7 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.29■□□□□ 0.84
TMX2-CTNND1H3BSU7 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.29■□□□□ 0.84
TMX2-CTNND1H3BSU7 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TMX2-CTNND1H3BSU7 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TMX2-CTNND1H3BSU7 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
TMX2-CTNND1H3BSU7 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.29■□□□□ 0.84
TMX2-CTNND1H3BSU7 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
TMX2-CTNND1H3BSU7 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TMX2-CTNND1H3BSU7 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.28■□□□□ 0.84
TMX2-CTNND1H3BSU7 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
TMX2-CTNND1H3BSU7 KRT16P2-201ENST00000414673 1423 ntBASIC20.28■□□□□ 0.84
TMX2-CTNND1H3BSU7 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
TMX2-CTNND1H3BSU7 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.28■□□□□ 0.84
TMX2-CTNND1H3BSU7 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.28■□□□□ 0.84
TMX2-CTNND1H3BSU7 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.28■□□□□ 0.84
TMX2-CTNND1H3BSU7 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TMX2-CTNND1H3BSU7 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
TMX2-CTNND1H3BSU7 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
TMX2-CTNND1H3BSU7 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TMX2-CTNND1H3BSU7 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TMX2-CTNND1H3BSU7 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.28■□□□□ 0.84
TMX2-CTNND1H3BSU7 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TMX2-CTNND1H3BSU7 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
TMX2-CTNND1H3BSU7 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
TMX2-CTNND1H3BSU7 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.27■□□□□ 0.84
TMX2-CTNND1H3BSU7 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
TMX2-CTNND1H3BSU7 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
TMX2-CTNND1H3BSU7 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
TMX2-CTNND1H3BSU7 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TMX2-CTNND1H3BSU7 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
TMX2-CTNND1H3BSU7 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.27■□□□□ 0.84
TMX2-CTNND1H3BSU7 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.27■□□□□ 0.84
TMX2-CTNND1H3BSU7 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.27■□□□□ 0.84
TMX2-CTNND1H3BSU7 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TMX2-CTNND1H3BSU7 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TMX2-CTNND1H3BSU7 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
TMX2-CTNND1H3BSU7 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TMX2-CTNND1H3BSU7 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.83
TMX2-CTNND1H3BSU7 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms