Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 IRS3P-201ENST00000223076 1006 ntBASIC16.56■□□□□ 0.24
CGB1A6NKQ9 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CGB1A6NKQ9 MIR638-201ENST00000385237 100 ntBASIC16.56■□□□□ 0.24
CGB1A6NKQ9 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC16.56■□□□□ 0.24
CGB1A6NKQ9 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.56■□□□□ 0.24
CGB1A6NKQ9 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
CGB1A6NKQ9 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
CGB1A6NKQ9 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
CGB1A6NKQ9 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CGB1A6NKQ9 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
CGB1A6NKQ9 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CGB1A6NKQ9 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CGB1A6NKQ9 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CGB1A6NKQ9 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CGB1A6NKQ9 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC16.56■□□□□ 0.24
CGB1A6NKQ9 LINC01006-201ENST00000333319 2292 ntBASIC16.56■□□□□ 0.24
CGB1A6NKQ9 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CGB1A6NKQ9 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
CGB1A6NKQ9 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC16.55■□□□□ 0.24
CGB1A6NKQ9 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CGB1A6NKQ9 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CGB1A6NKQ9 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CGB1A6NKQ9 LINC01521-201ENST00000504184 1943 ntBASIC16.55■□□□□ 0.24
CGB1A6NKQ9 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CGB1A6NKQ9 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CGB1A6NKQ9 ME2-216ENST00000639850 2331 ntTSL 5 BASIC16.55■□□□□ 0.24
CGB1A6NKQ9 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CGB1A6NKQ9 NME4-202ENST00000382940 766 ntTSL 3 BASIC16.55■□□□□ 0.24
CGB1A6NKQ9 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CGB1A6NKQ9 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC16.55■□□□□ 0.24
CGB1A6NKQ9 NME4-211ENST00000620944 1193 ntTSL 2 BASIC16.55■□□□□ 0.24
CGB1A6NKQ9 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CGB1A6NKQ9 AC121338.2-201ENST00000622535 1744 ntBASIC16.55■□□□□ 0.24
CGB1A6NKQ9 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC16.55■□□□□ 0.24
CGB1A6NKQ9 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC16.55■□□□□ 0.24
CGB1A6NKQ9 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CGB1A6NKQ9 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CGB1A6NKQ9 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CGB1A6NKQ9 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CGB1A6NKQ9 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC16.55■□□□□ 0.24
CGB1A6NKQ9 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
CGB1A6NKQ9 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CGB1A6NKQ9 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
CGB1A6NKQ9 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CGB1A6NKQ9 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CGB1A6NKQ9 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CGB1A6NKQ9 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
CGB1A6NKQ9 AC027612.3-201ENST00000413684 1047 ntBASIC16.54■□□□□ 0.24
CGB1A6NKQ9 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC16.54■□□□□ 0.24
CGB1A6NKQ9 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC16.54■□□□□ 0.24
CGB1A6NKQ9 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CGB1A6NKQ9 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
CGB1A6NKQ9 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
CGB1A6NKQ9 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC16.54■□□□□ 0.24
CGB1A6NKQ9 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
CGB1A6NKQ9 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CGB1A6NKQ9 AC138932.1-201ENST00000534164 6830 ntBASIC16.53■□□□□ 0.24
CGB1A6NKQ9 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CGB1A6NKQ9 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
CGB1A6NKQ9 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CGB1A6NKQ9 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CGB1A6NKQ9 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CGB1A6NKQ9 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CGB1A6NKQ9 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC16.53■□□□□ 0.24
CGB1A6NKQ9 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC16.53■□□□□ 0.24
CGB1A6NKQ9 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
CGB1A6NKQ9 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CGB1A6NKQ9 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CGB1A6NKQ9 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC16.53■□□□□ 0.24
CGB1A6NKQ9 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CGB1A6NKQ9 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
CGB1A6NKQ9 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CGB1A6NKQ9 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CGB1A6NKQ9 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CGB1A6NKQ9 MED17-221ENST00000639724 2317 ntTSL 5 BASIC16.52■□□□□ 0.24
CGB1A6NKQ9 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CGB1A6NKQ9 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CGB1A6NKQ9 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CGB1A6NKQ9 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC16.52■□□□□ 0.24
CGB1A6NKQ9 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CGB1A6NKQ9 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC16.52■□□□□ 0.24
CGB1A6NKQ9 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CGB1A6NKQ9 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CGB1A6NKQ9 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CGB1A6NKQ9 AC079140.4-201ENST00000507448 529 ntBASIC16.52■□□□□ 0.24
CGB1A6NKQ9 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CGB1A6NKQ9 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CGB1A6NKQ9 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CGB1A6NKQ9 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC16.52■□□□□ 0.23
CGB1A6NKQ9 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CGB1A6NKQ9 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CGB1A6NKQ9 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CGB1A6NKQ9 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CGB1A6NKQ9 AC092667.1-201ENST00000434301 2586 ntBASIC16.51■□□□□ 0.23
CGB1A6NKQ9 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CGB1A6NKQ9 EXOC3-AS1-202ENST00000623673 1663 ntBASIC16.51■□□□□ 0.23
CGB1A6NKQ9 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CGB1A6NKQ9 AP004607.4-201ENST00000530158 1459 ntBASIC16.51■□□□□ 0.23
CGB1A6NKQ9 KRT87P-202ENST00000534226 1464 ntBASIC16.51■□□□□ 0.23
CGB1A6NKQ9 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms