Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC24.46■■□□□ 1.51
TMEM88BA6NKF7 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
TMEM88BA6NKF7 AL137013.1-201ENST00000432946 1228 ntBASIC24.46■■□□□ 1.51
TMEM88BA6NKF7 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC24.46■■□□□ 1.51
TMEM88BA6NKF7 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC24.46■■□□□ 1.51
TMEM88BA6NKF7 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC24.46■■□□□ 1.51
TMEM88BA6NKF7 Six3os1_6.1-201ENST00000620790 196 ntBASIC24.46■■□□□ 1.51
TMEM88BA6NKF7 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC24.46■■□□□ 1.51
TMEM88BA6NKF7 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
TMEM88BA6NKF7 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC24.46■■□□□ 1.51
TMEM88BA6NKF7 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC24.46■■□□□ 1.51
TMEM88BA6NKF7 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
TMEM88BA6NKF7 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
TMEM88BA6NKF7 KRT8P9-201ENST00000558927 1449 ntBASIC24.45■■□□□ 1.51
TMEM88BA6NKF7 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
TMEM88BA6NKF7 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
TMEM88BA6NKF7 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC24.45■■□□□ 1.5
TMEM88BA6NKF7 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
TMEM88BA6NKF7 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC24.45■■□□□ 1.5
TMEM88BA6NKF7 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC24.45■■□□□ 1.5
TMEM88BA6NKF7 RBM42-202ENST00000586618 771 ntTSL 3 BASIC24.45■■□□□ 1.5
TMEM88BA6NKF7 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.5
TMEM88BA6NKF7 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC24.45■■□□□ 1.5
TMEM88BA6NKF7 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
TMEM88BA6NKF7 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
TMEM88BA6NKF7 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC24.45■■□□□ 1.5
TMEM88BA6NKF7 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
TMEM88BA6NKF7 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
TMEM88BA6NKF7 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC24.44■■□□□ 1.5
TMEM88BA6NKF7 AC004812.2-201ENST00000611079 2094 ntBASIC24.44■■□□□ 1.5
TMEM88BA6NKF7 LINC01568-207ENST00000641790 1380 ntBASIC24.44■■□□□ 1.5
TMEM88BA6NKF7 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
TMEM88BA6NKF7 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
TMEM88BA6NKF7 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC24.44■■□□□ 1.5
TMEM88BA6NKF7 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
TMEM88BA6NKF7 DUT-205ENST00000558813 769 ntTSL 2 BASIC24.44■■□□□ 1.5
TMEM88BA6NKF7 AF186192.3-201ENST00000583427 947 ntBASIC24.44■■□□□ 1.5
TMEM88BA6NKF7 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC24.44■■□□□ 1.5
TMEM88BA6NKF7 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC24.44■■□□□ 1.5
TMEM88BA6NKF7 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
TMEM88BA6NKF7 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
TMEM88BA6NKF7 CYP21A1P-202ENST00000354927 1481 ntBASIC24.44■■□□□ 1.5
TMEM88BA6NKF7 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC24.44■■□□□ 1.5
TMEM88BA6NKF7 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
TMEM88BA6NKF7 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
TMEM88BA6NKF7 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
TMEM88BA6NKF7 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC24.43■■□□□ 1.5
TMEM88BA6NKF7 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC24.43■■□□□ 1.5
TMEM88BA6NKF7 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC24.43■■□□□ 1.5
TMEM88BA6NKF7 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC24.43■■□□□ 1.5
TMEM88BA6NKF7 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC24.43■■□□□ 1.5
TMEM88BA6NKF7 CFL2-205ENST00000555765 632 ntTSL 2 BASIC24.43■■□□□ 1.5
TMEM88BA6NKF7 AL121894.2-201ENST00000602977 491 ntBASIC24.43■■□□□ 1.5
TMEM88BA6NKF7 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC24.43■■□□□ 1.5
TMEM88BA6NKF7 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
TMEM88BA6NKF7 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
TMEM88BA6NKF7 AC007322.3-201ENST00000426526 701 ntBASIC24.42■■□□□ 1.5
TMEM88BA6NKF7 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
TMEM88BA6NKF7 RPS15-203ENST00000586096 570 ntTSL 2 BASIC24.42■■□□□ 1.5
TMEM88BA6NKF7 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC24.42■■□□□ 1.5
TMEM88BA6NKF7 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC24.42■■□□□ 1.5
TMEM88BA6NKF7 AC006557.6-201ENST00000623071 864 ntBASIC24.42■■□□□ 1.5
TMEM88BA6NKF7 GLDC-219ENST00000640208 420 ntTSL 2 BASIC24.42■■□□□ 1.5
TMEM88BA6NKF7 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC24.42■■□□□ 1.5
TMEM88BA6NKF7 AC073508.3-201ENST00000619697 1419 ntBASIC24.42■■□□□ 1.5
TMEM88BA6NKF7 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.5
TMEM88BA6NKF7 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.5
TMEM88BA6NKF7 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
TMEM88BA6NKF7 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC24.41■■□□□ 1.5
TMEM88BA6NKF7 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC24.41■■□□□ 1.5
TMEM88BA6NKF7 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
TMEM88BA6NKF7 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC24.41■■□□□ 1.5
TMEM88BA6NKF7 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
TMEM88BA6NKF7 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC24.41■■□□□ 1.5
TMEM88BA6NKF7 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC24.41■■□□□ 1.5
TMEM88BA6NKF7 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC24.41■■□□□ 1.5
TMEM88BA6NKF7 RBM17P1-201ENST00000453646 1190 ntBASIC24.41■■□□□ 1.5
TMEM88BA6NKF7 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC24.41■■□□□ 1.5
TMEM88BA6NKF7 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
TMEM88BA6NKF7 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC24.41■■□□□ 1.5
TMEM88BA6NKF7 DECR2-212ENST00000627716 352 ntTSL 2 BASIC24.41■■□□□ 1.5
TMEM88BA6NKF7 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC24.4■■□□□ 1.5
TMEM88BA6NKF7 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC24.4■■□□□ 1.5
TMEM88BA6NKF7 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
TMEM88BA6NKF7 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
TMEM88BA6NKF7 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC24.4■■□□□ 1.5
TMEM88BA6NKF7 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC24.4■■□□□ 1.5
TMEM88BA6NKF7 AC104076.2-201ENST00000448912 469 ntBASIC24.4■■□□□ 1.5
TMEM88BA6NKF7 AC005829.2-201ENST00000571422 1056 ntBASIC24.4■■□□□ 1.5
TMEM88BA6NKF7 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC24.4■■□□□ 1.5
TMEM88BA6NKF7 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
TMEM88BA6NKF7 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC24.4■■□□□ 1.5
TMEM88BA6NKF7 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
TMEM88BA6NKF7 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
TMEM88BA6NKF7 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC24.39■■□□□ 1.5
TMEM88BA6NKF7 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC24.39■■□□□ 1.5
TMEM88BA6NKF7 AC087633.2-202ENST00000565166 1439 ntBASIC24.39■■□□□ 1.5
TMEM88BA6NKF7 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC24.39■■□□□ 1.49
TMEM88BA6NKF7 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC24.39■■□□□ 1.49
TMEM88BA6NKF7 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC24.39■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms