Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LINC01549A6NIU2 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LINC01549A6NIU2 AC018445.3-201ENST00000624177 1945 ntBASIC14.72□□□□□ -0.05
LINC01549A6NIU2 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LINC01549A6NIU2 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LINC01549A6NIU2 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC14.72□□□□□ -0.05
LINC01549A6NIU2 ME2-218ENST00000640965 2476 ntTSL 5 BASIC14.72□□□□□ -0.05
LINC01549A6NIU2 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
LINC01549A6NIU2 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC14.72□□□□□ -0.05
LINC01549A6NIU2 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
LINC01549A6NIU2 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
LINC01549A6NIU2 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
LINC01549A6NIU2 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
LINC01549A6NIU2 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LINC01549A6NIU2 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LINC01549A6NIU2 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
LINC01549A6NIU2 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LINC01549A6NIU2 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
LINC01549A6NIU2 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
LINC01549A6NIU2 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LINC01549A6NIU2 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LINC01549A6NIU2 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LINC01549A6NIU2 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
LINC01549A6NIU2 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LINC01549A6NIU2 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LINC01549A6NIU2 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
LINC01549A6NIU2 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC14.72□□□□□ -0.05
LINC01549A6NIU2 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LINC01549A6NIU2 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LINC01549A6NIU2 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
LINC01549A6NIU2 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
LINC01549A6NIU2 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LINC01549A6NIU2 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC14.71□□□□□ -0.05
LINC01549A6NIU2 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LINC01549A6NIU2 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LINC01549A6NIU2 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LINC01549A6NIU2 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC14.71□□□□□ -0.05
LINC01549A6NIU2 AC027702.1-201ENST00000563810 1770 ntBASIC14.71□□□□□ -0.05
LINC01549A6NIU2 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LINC01549A6NIU2 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
LINC01549A6NIU2 KRT18P60-201ENST00000312876 1297 ntBASIC14.71□□□□□ -0.05
LINC01549A6NIU2 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
LINC01549A6NIU2 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC14.71□□□□□ -0.05
LINC01549A6NIU2 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC14.71□□□□□ -0.05
LINC01549A6NIU2 U85056.1-201ENST00000616429 682 ntBASIC14.71□□□□□ -0.05
LINC01549A6NIU2 AC241377.3-202ENST00000626088 1088 ntBASIC14.71□□□□□ -0.05
LINC01549A6NIU2 AC241585.3-202ENST00000628937 1088 ntBASIC14.71□□□□□ -0.05
LINC01549A6NIU2 AC245100.8-202ENST00000629247 1058 ntBASIC14.71□□□□□ -0.05
LINC01549A6NIU2 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
LINC01549A6NIU2 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
LINC01549A6NIU2 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
LINC01549A6NIU2 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
LINC01549A6NIU2 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC14.71□□□□□ -0.05
LINC01549A6NIU2 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
LINC01549A6NIU2 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
LINC01549A6NIU2 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC14.71□□□□□ -0.06
LINC01549A6NIU2 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.06
LINC01549A6NIU2 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
LINC01549A6NIU2 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
LINC01549A6NIU2 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
LINC01549A6NIU2 AC003102.1-202ENST00000563394 1796 ntBASIC14.7□□□□□ -0.06
LINC01549A6NIU2 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LINC01549A6NIU2 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LINC01549A6NIU2 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
LINC01549A6NIU2 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LINC01549A6NIU2 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LINC01549A6NIU2 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
LINC01549A6NIU2 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LINC01549A6NIU2 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LINC01549A6NIU2 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
LINC01549A6NIU2 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LINC01549A6NIU2 SENP5-202ENST00000419026 973 ntTSL 3 BASIC14.7□□□□□ -0.06
LINC01549A6NIU2 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC14.7□□□□□ -0.06
LINC01549A6NIU2 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LINC01549A6NIU2 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LINC01549A6NIU2 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC14.7□□□□□ -0.06
LINC01549A6NIU2 CLTA-210ENST00000540080 989 ntTSL 2 BASIC14.7□□□□□ -0.06
LINC01549A6NIU2 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC14.7□□□□□ -0.06
LINC01549A6NIU2 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC14.7□□□□□ -0.06
LINC01549A6NIU2 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC14.7□□□□□ -0.06
LINC01549A6NIU2 MIR4508-201ENST00000584178 70 ntBASIC14.7□□□□□ -0.06
LINC01549A6NIU2 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LINC01549A6NIU2 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LINC01549A6NIU2 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
LINC01549A6NIU2 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LINC01549A6NIU2 AL162377.1-201ENST00000618844 1793 ntBASIC14.7□□□□□ -0.06
LINC01549A6NIU2 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
LINC01549A6NIU2 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LINC01549A6NIU2 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
LINC01549A6NIU2 BID-204ENST00000399767 2129 ntTSL 2 BASIC14.69□□□□□ -0.06
LINC01549A6NIU2 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
LINC01549A6NIU2 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC14.69□□□□□ -0.06
LINC01549A6NIU2 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LINC01549A6NIU2 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC14.69□□□□□ -0.06
LINC01549A6NIU2 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
LINC01549A6NIU2 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LINC01549A6NIU2 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
LINC01549A6NIU2 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
LINC01549A6NIU2 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LINC01549A6NIU2 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms