Protein–RNA interactions for Protein: A6NH52

TVP23A, Golgi apparatus membrane protein TVP23 homolog A, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23AA6NH52 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TVP23AA6NH52 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TVP23AA6NH52 AL121603.2-201ENST00000557373 2117 ntBASIC18.49■□□□□ 0.55
TVP23AA6NH52 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
TVP23AA6NH52 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.48■□□□□ 0.55
TVP23AA6NH52 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TVP23AA6NH52 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.48■□□□□ 0.55
TVP23AA6NH52 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TVP23AA6NH52 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TVP23AA6NH52 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TVP23AA6NH52 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TVP23AA6NH52 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.48■□□□□ 0.55
TVP23AA6NH52 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
TVP23AA6NH52 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TVP23AA6NH52 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
TVP23AA6NH52 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.48■□□□□ 0.55
TVP23AA6NH52 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.48■□□□□ 0.55
TVP23AA6NH52 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TVP23AA6NH52 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
TVP23AA6NH52 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TVP23AA6NH52 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TVP23AA6NH52 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.47■□□□□ 0.55
TVP23AA6NH52 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TVP23AA6NH52 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.47■□□□□ 0.55
TVP23AA6NH52 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TVP23AA6NH52 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TVP23AA6NH52 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
TVP23AA6NH52 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TVP23AA6NH52 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TVP23AA6NH52 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TVP23AA6NH52 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TVP23AA6NH52 NT5C3AP1-201ENST00000394500 1012 ntBASIC18.47■□□□□ 0.55
TVP23AA6NH52 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TVP23AA6NH52 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC18.47■□□□□ 0.55
TVP23AA6NH52 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.47■□□□□ 0.55
TVP23AA6NH52 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC18.47■□□□□ 0.55
TVP23AA6NH52 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC18.47■□□□□ 0.55
TVP23AA6NH52 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC18.47■□□□□ 0.55
TVP23AA6NH52 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC18.47■□□□□ 0.55
TVP23AA6NH52 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC18.47■□□□□ 0.55
TVP23AA6NH52 MIR6084-201ENST00000622012 110 ntBASIC18.47■□□□□ 0.55
TVP23AA6NH52 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TVP23AA6NH52 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.47■□□□□ 0.55
TVP23AA6NH52 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.46■□□□□ 0.55
TVP23AA6NH52 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TVP23AA6NH52 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.46■□□□□ 0.55
TVP23AA6NH52 AC073314.1-201ENST00000568729 2216 ntBASIC18.46■□□□□ 0.55
TVP23AA6NH52 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
TVP23AA6NH52 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TVP23AA6NH52 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TVP23AA6NH52 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TVP23AA6NH52 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
TVP23AA6NH52 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TVP23AA6NH52 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
TVP23AA6NH52 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.46■□□□□ 0.55
TVP23AA6NH52 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TVP23AA6NH52 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC18.46■□□□□ 0.55
TVP23AA6NH52 STOX2-205ENST00000513034 807 ntTSL 3 BASIC18.46■□□□□ 0.55
TVP23AA6NH52 EEF1DP3-203ENST00000566025 782 ntBASIC18.46■□□□□ 0.55
TVP23AA6NH52 AL139246.5-201ENST00000606645 996 ntBASIC18.46■□□□□ 0.55
TVP23AA6NH52 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
TVP23AA6NH52 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC18.46■□□□□ 0.55
TVP23AA6NH52 RALB-208ENST00000631312 311 ntTSL 5 BASIC18.46■□□□□ 0.55
TVP23AA6NH52 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
TVP23AA6NH52 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TVP23AA6NH52 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TVP23AA6NH52 AC061975.6-201ENST00000579045 1553 ntBASIC18.46■□□□□ 0.55
TVP23AA6NH52 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TVP23AA6NH52 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TVP23AA6NH52 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.46■□□□□ 0.54
TVP23AA6NH52 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
TVP23AA6NH52 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
TVP23AA6NH52 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
TVP23AA6NH52 MFF-207ENST00000409565 1548 ntTSL 2 BASIC18.45■□□□□ 0.54
TVP23AA6NH52 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TVP23AA6NH52 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TVP23AA6NH52 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC18.45■□□□□ 0.54
TVP23AA6NH52 AC142381.2-201ENST00000566120 298 ntBASIC18.45■□□□□ 0.54
TVP23AA6NH52 TPRG1LP1-201ENST00000598702 760 ntBASIC18.45■□□□□ 0.54
TVP23AA6NH52 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
TVP23AA6NH52 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TVP23AA6NH52 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
TVP23AA6NH52 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TVP23AA6NH52 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TVP23AA6NH52 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
TVP23AA6NH52 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TVP23AA6NH52 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
TVP23AA6NH52 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.44■□□□□ 0.54
TVP23AA6NH52 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.44■□□□□ 0.54
TVP23AA6NH52 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
TVP23AA6NH52 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
TVP23AA6NH52 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TVP23AA6NH52 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TVP23AA6NH52 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC18.44■□□□□ 0.54
TVP23AA6NH52 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TVP23AA6NH52 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TVP23AA6NH52 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC18.44■□□□□ 0.54
TVP23AA6NH52 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC18.44■□□□□ 0.54
TVP23AA6NH52 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC18.44■□□□□ 0.54
TVP23AA6NH52 AC053503.5-201ENST00000601508 636 ntBASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms