Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC22.85■■□□□ 1.25
TRIM49BA6NDI0 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC22.85■■□□□ 1.25
TRIM49BA6NDI0 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
TRIM49BA6NDI0 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
TRIM49BA6NDI0 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
TRIM49BA6NDI0 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
TRIM49BA6NDI0 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC22.85■■□□□ 1.25
TRIM49BA6NDI0 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
TRIM49BA6NDI0 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
TRIM49BA6NDI0 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
TRIM49BA6NDI0 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC22.84■■□□□ 1.25
TRIM49BA6NDI0 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
TRIM49BA6NDI0 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
TRIM49BA6NDI0 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC22.84■■□□□ 1.25
TRIM49BA6NDI0 TERF1P2-201ENST00000583350 1212 ntBASIC22.84■■□□□ 1.25
TRIM49BA6NDI0 RARRES2P11-201ENST00000635158 484 ntBASIC22.84■■□□□ 1.25
TRIM49BA6NDI0 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC22.84■■□□□ 1.25
TRIM49BA6NDI0 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
TRIM49BA6NDI0 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
TRIM49BA6NDI0 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
TRIM49BA6NDI0 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
TRIM49BA6NDI0 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
TRIM49BA6NDI0 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
TRIM49BA6NDI0 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
TRIM49BA6NDI0 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC22.84■■□□□ 1.25
TRIM49BA6NDI0 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC22.84■■□□□ 1.25
TRIM49BA6NDI0 BID-203ENST00000399765 1879 ntTSL 2 BASIC22.83■■□□□ 1.25
TRIM49BA6NDI0 FP700111.2-201ENST00000619190 1892 ntBASIC22.83■■□□□ 1.25
TRIM49BA6NDI0 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC22.83■■□□□ 1.25
TRIM49BA6NDI0 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC22.83■■□□□ 1.25
TRIM49BA6NDI0 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC22.83■■□□□ 1.25
TRIM49BA6NDI0 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
TRIM49BA6NDI0 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC22.83■■□□□ 1.25
TRIM49BA6NDI0 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC22.83■■□□□ 1.25
TRIM49BA6NDI0 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
TRIM49BA6NDI0 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.25
TRIM49BA6NDI0 POU5F1P4-201ENST00000413175 1085 ntBASIC22.83■■□□□ 1.25
TRIM49BA6NDI0 YBX1P1-201ENST00000445822 960 ntBASIC22.83■■□□□ 1.25
TRIM49BA6NDI0 AC010141.2-201ENST00000452426 721 ntBASIC22.83■■□□□ 1.25
TRIM49BA6NDI0 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC22.83■■□□□ 1.25
TRIM49BA6NDI0 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC22.83■■□□□ 1.25
TRIM49BA6NDI0 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC22.83■■□□□ 1.25
TRIM49BA6NDI0 CCDC92B-201ENST00000575506 885 ntBASIC22.83■■□□□ 1.25
TRIM49BA6NDI0 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC22.83■■□□□ 1.25
TRIM49BA6NDI0 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC22.83■■□□□ 1.24
TRIM49BA6NDI0 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
TRIM49BA6NDI0 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC22.83■■□□□ 1.24
TRIM49BA6NDI0 GABARAPL3-202ENST00000624044 1851 ntBASIC22.83■■□□□ 1.24
TRIM49BA6NDI0 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC22.83■■□□□ 1.24
TRIM49BA6NDI0 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC22.83■■□□□ 1.24
TRIM49BA6NDI0 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
TRIM49BA6NDI0 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC22.82■■□□□ 1.24
TRIM49BA6NDI0 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC22.82■■□□□ 1.24
TRIM49BA6NDI0 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
TRIM49BA6NDI0 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
TRIM49BA6NDI0 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
TRIM49BA6NDI0 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC22.82■■□□□ 1.24
TRIM49BA6NDI0 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
TRIM49BA6NDI0 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
TRIM49BA6NDI0 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC22.82■■□□□ 1.24
TRIM49BA6NDI0 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
TRIM49BA6NDI0 AC123595.1-201ENST00000440769 1046 ntBASIC22.82■■□□□ 1.24
TRIM49BA6NDI0 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC22.82■■□□□ 1.24
TRIM49BA6NDI0 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC22.82■■□□□ 1.24
TRIM49BA6NDI0 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
TRIM49BA6NDI0 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
TRIM49BA6NDI0 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
TRIM49BA6NDI0 AL391422.3-201ENST00000603791 2761 ntBASIC22.82■■□□□ 1.24
TRIM49BA6NDI0 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
TRIM49BA6NDI0 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
TRIM49BA6NDI0 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
TRIM49BA6NDI0 AC011484.1-201ENST00000377652 1995 ntBASIC22.81■■□□□ 1.24
TRIM49BA6NDI0 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC22.81■■□□□ 1.24
TRIM49BA6NDI0 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
TRIM49BA6NDI0 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC22.81■■□□□ 1.24
TRIM49BA6NDI0 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC22.81■■□□□ 1.24
TRIM49BA6NDI0 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC22.81■■□□□ 1.24
TRIM49BA6NDI0 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
TRIM49BA6NDI0 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
TRIM49BA6NDI0 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
TRIM49BA6NDI0 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC22.81■■□□□ 1.24
TRIM49BA6NDI0 SLC7A5P2-201ENST00000553010 536 ntBASIC22.81■■□□□ 1.24
TRIM49BA6NDI0 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC22.81■■□□□ 1.24
TRIM49BA6NDI0 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC22.81■■□□□ 1.24
TRIM49BA6NDI0 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
TRIM49BA6NDI0 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
TRIM49BA6NDI0 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
TRIM49BA6NDI0 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
TRIM49BA6NDI0 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC22.81■■□□□ 1.24
TRIM49BA6NDI0 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
TRIM49BA6NDI0 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC22.81■■□□□ 1.24
TRIM49BA6NDI0 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC22.81■■□□□ 1.24
TRIM49BA6NDI0 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC22.81■■□□□ 1.24
TRIM49BA6NDI0 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC22.81■■□□□ 1.24
TRIM49BA6NDI0 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC22.81■■□□□ 1.24
TRIM49BA6NDI0 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC22.8■■□□□ 1.24
TRIM49BA6NDI0 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC22.8■■□□□ 1.24
TRIM49BA6NDI0 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
TRIM49BA6NDI0 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC22.8■■□□□ 1.24
TRIM49BA6NDI0 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC22.8■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms