Protein–RNA interactions for Protein: A0A0A6YY99

TNFSF12-TNFSF13, Protein TNFSF12-TNFSF13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12-TNFSF13A0A0A6YY99 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TNFSF12-TNFSF13A0A0A6YY99 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.88■□□□□ 0.61
TNFSF12-TNFSF13A0A0A6YY99 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
TNFSF12-TNFSF13A0A0A6YY99 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
TNFSF12-TNFSF13A0A0A6YY99 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.88■□□□□ 0.61
TNFSF12-TNFSF13A0A0A6YY99 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.88■□□□□ 0.61
TNFSF12-TNFSF13A0A0A6YY99 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
TNFSF12-TNFSF13A0A0A6YY99 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.88■□□□□ 0.61
TNFSF12-TNFSF13A0A0A6YY99 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC18.88■□□□□ 0.61
TNFSF12-TNFSF13A0A0A6YY99 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.88■□□□□ 0.61
TNFSF12-TNFSF13A0A0A6YY99 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.88■□□□□ 0.61
TNFSF12-TNFSF13A0A0A6YY99 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC18.88■□□□□ 0.61
TNFSF12-TNFSF13A0A0A6YY99 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TNFSF12-TNFSF13A0A0A6YY99 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.88■□□□□ 0.61
TNFSF12-TNFSF13A0A0A6YY99 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
TNFSF12-TNFSF13A0A0A6YY99 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TNFSF12-TNFSF13A0A0A6YY99 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TNFSF12-TNFSF13A0A0A6YY99 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
TNFSF12-TNFSF13A0A0A6YY99 AC005229.4-201ENST00000610085 2198 ntBASIC18.88■□□□□ 0.61
TNFSF12-TNFSF13A0A0A6YY99 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC18.88■□□□□ 0.61
TNFSF12-TNFSF13A0A0A6YY99 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.88■□□□□ 0.61
TNFSF12-TNFSF13A0A0A6YY99 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TNFSF12-TNFSF13A0A0A6YY99 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TNFSF12-TNFSF13A0A0A6YY99 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TNFSF12-TNFSF13A0A0A6YY99 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TNFSF12-TNFSF13A0A0A6YY99 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
TNFSF12-TNFSF13A0A0A6YY99 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
TNFSF12-TNFSF13A0A0A6YY99 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.87■□□□□ 0.61
TNFSF12-TNFSF13A0A0A6YY99 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
TNFSF12-TNFSF13A0A0A6YY99 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.87■□□□□ 0.61
TNFSF12-TNFSF13A0A0A6YY99 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TNFSF12-TNFSF13A0A0A6YY99 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TNFSF12-TNFSF13A0A0A6YY99 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TNFSF12-TNFSF13A0A0A6YY99 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TNFSF12-TNFSF13A0A0A6YY99 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
TNFSF12-TNFSF13A0A0A6YY99 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
TNFSF12-TNFSF13A0A0A6YY99 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TNFSF12-TNFSF13A0A0A6YY99 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TNFSF12-TNFSF13A0A0A6YY99 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TNFSF12-TNFSF13A0A0A6YY99 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TNFSF12-TNFSF13A0A0A6YY99 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TNFSF12-TNFSF13A0A0A6YY99 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC18.86■□□□□ 0.61
TNFSF12-TNFSF13A0A0A6YY99 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TNFSF12-TNFSF13A0A0A6YY99 CROCCP5-201ENST00000436658 830 ntBASIC18.86■□□□□ 0.61
TNFSF12-TNFSF13A0A0A6YY99 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.86■□□□□ 0.61
TNFSF12-TNFSF13A0A0A6YY99 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.86■□□□□ 0.61
TNFSF12-TNFSF13A0A0A6YY99 AC243732.1-201ENST00000612648 864 ntBASIC18.86■□□□□ 0.61
TNFSF12-TNFSF13A0A0A6YY99 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.86■□□□□ 0.61
TNFSF12-TNFSF13A0A0A6YY99 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TNFSF12-TNFSF13A0A0A6YY99 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
TNFSF12-TNFSF13A0A0A6YY99 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
TNFSF12-TNFSF13A0A0A6YY99 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TNFSF12-TNFSF13A0A0A6YY99 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TNFSF12-TNFSF13A0A0A6YY99 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
TNFSF12-TNFSF13A0A0A6YY99 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TNFSF12-TNFSF13A0A0A6YY99 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.85■□□□□ 0.61
TNFSF12-TNFSF13A0A0A6YY99 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
TNFSF12-TNFSF13A0A0A6YY99 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
TNFSF12-TNFSF13A0A0A6YY99 RBM17P2-201ENST00000616397 1405 ntBASIC18.85■□□□□ 0.61
TNFSF12-TNFSF13A0A0A6YY99 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
TNFSF12-TNFSF13A0A0A6YY99 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TNFSF12-TNFSF13A0A0A6YY99 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TNFSF12-TNFSF13A0A0A6YY99 HLA-L-209ENST00000420110 1011 ntBASIC18.85■□□□□ 0.61
TNFSF12-TNFSF13A0A0A6YY99 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
TNFSF12-TNFSF13A0A0A6YY99 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.85■□□□□ 0.61
TNFSF12-TNFSF13A0A0A6YY99 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.85■□□□□ 0.61
TNFSF12-TNFSF13A0A0A6YY99 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.85■□□□□ 0.61
TNFSF12-TNFSF13A0A0A6YY99 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.85■□□□□ 0.61
TNFSF12-TNFSF13A0A0A6YY99 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.85■□□□□ 0.61
TNFSF12-TNFSF13A0A0A6YY99 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
TNFSF12-TNFSF13A0A0A6YY99 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TNFSF12-TNFSF13A0A0A6YY99 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TNFSF12-TNFSF13A0A0A6YY99 AL137060.1-201ENST00000618151 2648 ntBASIC18.85■□□□□ 0.61
TNFSF12-TNFSF13A0A0A6YY99 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TNFSF12-TNFSF13A0A0A6YY99 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
TNFSF12-TNFSF13A0A0A6YY99 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
TNFSF12-TNFSF13A0A0A6YY99 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.84■□□□□ 0.61
TNFSF12-TNFSF13A0A0A6YY99 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.84■□□□□ 0.61
TNFSF12-TNFSF13A0A0A6YY99 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC18.84■□□□□ 0.61
TNFSF12-TNFSF13A0A0A6YY99 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TNFSF12-TNFSF13A0A0A6YY99 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
TNFSF12-TNFSF13A0A0A6YY99 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.84■□□□□ 0.61
TNFSF12-TNFSF13A0A0A6YY99 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.84■□□□□ 0.61
TNFSF12-TNFSF13A0A0A6YY99 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC18.84■□□□□ 0.61
TNFSF12-TNFSF13A0A0A6YY99 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TNFSF12-TNFSF13A0A0A6YY99 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.83■□□□□ 0.61
TNFSF12-TNFSF13A0A0A6YY99 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TNFSF12-TNFSF13A0A0A6YY99 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TNFSF12-TNFSF13A0A0A6YY99 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.83■□□□□ 0.61
TNFSF12-TNFSF13A0A0A6YY99 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
TNFSF12-TNFSF13A0A0A6YY99 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.83■□□□□ 0.6
TNFSF12-TNFSF13A0A0A6YY99 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.83■□□□□ 0.6
TNFSF12-TNFSF13A0A0A6YY99 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC18.83■□□□□ 0.6
TNFSF12-TNFSF13A0A0A6YY99 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TNFSF12-TNFSF13A0A0A6YY99 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC18.83■□□□□ 0.6
TNFSF12-TNFSF13A0A0A6YY99 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TNFSF12-TNFSF13A0A0A6YY99 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.83■□□□□ 0.6
TNFSF12-TNFSF13A0A0A6YY99 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TNFSF12-TNFSF13A0A0A6YY99 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
TNFSF12-TNFSF13A0A0A6YY99 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms