Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 RPL35P2-201ENST00000402419 363 ntBASIC9.04□□□□□ -0.96
P04436 AC130710.1-202ENST00000428280 853 ntTSL 3 BASIC9.04□□□□□ -0.96
P04436 AL139287.1-201ENST00000444968 386 ntTSL 3 BASIC9.04□□□□□ -0.96
P04436 AC106820.1-201ENST00000468708 420 ntBASIC9.04□□□□□ -0.96
P04436 AC105416.1-201ENST00000506991 842 ntBASIC9.04□□□□□ -0.96
P04436 LINC02217-203ENST00000508677 296 ntTSL 3 BASIC9.04□□□□□ -0.96
P04436 AC010768.3-201ENST00000525465 792 ntBASIC9.04□□□□□ -0.96
P04436 AP001453.2-202ENST00000538355 431 ntTSL 2 BASIC9.04□□□□□ -0.96
P04436 OR7E106P-201ENST00000556941 1021 ntBASIC9.04□□□□□ -0.96
P04436 STX1B-202ENST00000565419 834 ntTSL 2 BASIC9.04□□□□□ -0.96
P04436 C6orf229-201ENST00000565469 814 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
P04436 AC116914.1-201ENST00000575043 398 ntTSL 2 BASIC9.04□□□□□ -0.96
P04436 AC127521.1-201ENST00000576086 854 ntTSL 3 BASIC9.04□□□□□ -0.96
P04436 AC129492.4-201ENST00000581248 465 ntTSL 2 BASIC9.04□□□□□ -0.96
P04436 FXYD5-210ENST00000588699 927 ntTSL 5 BASIC9.04□□□□□ -0.96
P04436 AC092127.2-201ENST00000602862 601 ntTSL 3 BASIC9.04□□□□□ -0.96
P04436 AC068888.1-205ENST00000607643 662 ntTSL 5 BASIC9.04□□□□□ -0.96
P04436 Metazoa_SRP.204-201ENST00000611908 247 ntBASIC9.04□□□□□ -0.96
P04436 TRBV7-9-201ENST00000612787 347 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
P04436 RN7SL428P-201ENST00000613848 247 ntBASIC9.04□□□□□ -0.96
P04436 RN7SL331P-201ENST00000618054 247 ntBASIC9.04□□□□□ -0.96
P04436 AC244093.2-201ENST00000620102 524 ntBASIC9.04□□□□□ -0.96
P04436 AC023509.2-201ENST00000548347 2297 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
P04436 RBM48-201ENST00000265732 1742 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
P04436 NFYC-212ENST00000440226 1717 ntAPPRIS P3 TSL 5 BASIC9.04□□□□□ -0.96
P04436 TRPV1-207ENST00000572705 4166 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
P04436 SIN3A-201ENST00000360439 5050 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
P04436 DAPK2-201ENST00000261891 2603 ntAPPRIS P1 TSL 2 BASIC9.04□□□□□ -0.96
P04436 AP001020.2-201ENST00000581712 1605 ntBASIC9.04□□□□□ -0.96
P04436 SMLR1-201ENST00000541421 2512 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
P04436 NCOA7-209ENST00000444128 2978 ntTSL 5 BASIC9.04□□□□□ -0.96
P04436 PIEZO2-201ENST00000302079 9356 ntTSL 5 BASIC9.04□□□□□ -0.96
P04436 FCAMR-203ENST00000400962 1898 ntAPPRIS P3 TSL 5 BASIC9.04□□□□□ -0.96
P04436 EFCAB11-209ENST00000556005 1856 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
P04436 CMKLR1-202ENST00000412676 5110 ntAPPRIS ALT2 TSL 3 BASIC9.04□□□□□ -0.96
P04436 SETBP1-201ENST00000282030 9899 ntAPPRIS P3 TSL 1 (best) BASIC9.04□□□□□ -0.96
P04436 CYP17A1-207ENST00000639393 1684 ntAPPRIS ALT1 TSL 5 BASIC9.04□□□□□ -0.96
P04436 LTN1-203ENST00000389195 2714 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
P04436 CCDC174-206ENST00000611584 2720 ntTSL 5 BASIC9.03□□□□□ -0.96
P04436 EIF4A2-201ENST00000323963 1919 ntAPPRIS P2 TSL 1 (best) BASIC9.03□□□□□ -0.96
P04436 KDM2A-201ENST00000308783 3666 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
P04436 PRAMEF17-201ENST00000376098 1578 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
P04436 ALOX12P2-210ENST00000574727 4326 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
P04436 RUFY2-213ENST00000602465 3863 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
P04436 KPNA3-201ENST00000261667 4474 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
P04436 APOL1-202ENST00000397278 2918 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
P04436 FRMD3-203ENST00000376434 1397 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
P04436 NBPF15-203ENST00000577412 4707 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
P04436 KRBA2-201ENST00000331336 1964 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
P04436 PFKM-202ENST00000340802 3176 ntTSL 2 BASIC9.03□□□□□ -0.96
P04436 PAMR1-208ENST00000621476 2842 ntTSL 2 BASIC9.03□□□□□ -0.96
P04436 KIAA0930-202ENST00000336156 8119 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
P04436 STK32A-203ENST00000398523 1637 ntTSL 2 BASIC9.03□□□□□ -0.96
P04436 PTK2B-210ENST00000517339 3914 ntTSL 2 BASIC9.03□□□□□ -0.96
P04436 CCDC58-201ENST00000291458 720 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
P04436 CIART-202ENST00000369094 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
P04436 CYP17A1-AS1-201ENST00000369884 491 ntTSL 2 BASIC9.03□□□□□ -0.96
P04436 SPACA3-203ENST00000394638 508 ntTSL 3 BASIC9.03□□□□□ -0.96
P04436 Z84484.1-201ENST00000411643 319 ntTSL 3 BASIC9.03□□□□□ -0.96
P04436 SMARCE1P5-201ENST00000412207 1225 ntBASIC9.03□□□□□ -0.96
P04436 AC079602.1-201ENST00000412750 271 ntBASIC9.03□□□□□ -0.96
P04436 Z98048.1-201ENST00000424746 491 ntBASIC9.03□□□□□ -0.96
P04436 AL354892.1-201ENST00000430250 335 ntTSL 3 BASIC9.03□□□□□ -0.96
P04436 DUXAP7-201ENST00000431038 689 ntBASIC9.03□□□□□ -0.96
P04436 AP001619.1-201ENST00000432411 447 ntTSL 3 BASIC9.03□□□□□ -0.96
P04436 IGFL2-202ENST00000434646 885 ntAPPRIS P4 TSL 1 (best) BASIC9.03□□□□□ -0.96
P04436 AC004448.3-201ENST00000435953 543 ntTSL 2 BASIC9.03□□□□□ -0.96
P04436 LINC01280-201ENST00000449783 1184 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
P04436 CTSLP4-201ENST00000454614 1002 ntBASIC9.03□□□□□ -0.96
P04436 PGAM4-201ENST00000458128 765 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
P04436 LGI1-204ENST00000478763 600 ntTSL 2 BASIC9.03□□□□□ -0.96
P04436 TPM3P9-202ENST00000492121 745 ntBASIC9.03□□□□□ -0.96
P04436 CCDC58-206ENST00000497726 438 ntTSL 5 BASIC9.03□□□□□ -0.96
P04436 SNORA33.3-201ENST00000516236 136 ntBASIC9.03□□□□□ -0.96
P04436 SNRPCP17-201ENST00000520330 205 ntBASIC9.03□□□□□ -0.96
P04436 HTR4-207ENST00000520514 1236 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
P04436 AP001330.1-201ENST00000524287 731 ntTSL 3 BASIC9.03□□□□□ -0.96
P04436 ATP5J2P5-201ENST00000537967 258 ntBASIC9.03□□□□□ -0.96
P04436 DAD1-204ENST00000538631 441 ntTSL 2 BASIC9.03□□□□□ -0.96
P04436 Metazoa_SRP.53-201ENST00000548393 281 ntBASIC9.03□□□□□ -0.96
P04436 AL392023.1-201ENST00000555655 531 ntTSL 3 BASIC9.03□□□□□ -0.96
P04436 AC027237.2-201ENST00000558702 391 ntTSL 3 BASIC9.03□□□□□ -0.96
P04436 AC103739.2-201ENST00000559839 807 ntTSL 4 BASIC9.03□□□□□ -0.96
P04436 MT1JP-202ENST00000563395 408 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
P04436 ULK4P2-205ENST00000570221 634 ntTSL 3 BASIC9.03□□□□□ -0.96
P04436 Metazoa_SRP.121-201ENST00000578843 303 ntBASIC9.03□□□□□ -0.96
P04436 AC005392.2-201ENST00000595748 301 ntTSL 3 BASIC9.03□□□□□ -0.96
P04436 TEX101-201ENST00000598265 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
P04436 AL596092.1-201ENST00000605701 304 ntBASIC9.03□□□□□ -0.96
P04436 TUSC8-202ENST00000607312 628 ntTSL 4 BASIC9.03□□□□□ -0.96
P04436 AC005696.3-201ENST00000608984 303 ntTSL 3 BASIC9.03□□□□□ -0.96
P04436 RN7SL627P-201ENST00000620534 303 ntBASIC9.03□□□□□ -0.96
P04436 PRSS51-204ENST00000637190 2149 ntTSL 5 BASIC9.03□□□□□ -0.96
P04436 MRPL11-203ENST00000430466 1527 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
P04436 CAMK2G-202ENST00000322635 3720 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
P04436 PDE11A-202ENST00000389683 1781 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
P04436 LPIN1-207ENST00000425416 5582 ntTSL 2 BASIC9.03□□□□□ -0.96
P04436 CAMSAP2-203ENST00000413307 4498 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
P04436 FBXL20-201ENST00000264658 10388 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
P04436 FCN1-202ENST00000616356 4369 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 126.9 ms