Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AC092902.2-220ENST00000626334 685 ntTSL 5 BASIC9.1□□□□□ -0.95
SNX18Q96RF0 OR2T32P-202ENST00000642003 1114 ntBASIC9.1□□□□□ -0.95
SNX18Q96RF0 AC093426.1-201ENST00000561926 3011 ntBASIC9.1□□□□□ -0.95
SNX18Q96RF0 PTRH2-202ENST00000409433 2246 ntAPPRIS ALT1 TSL 1 (best) BASIC9.1□□□□□ -0.95
SNX18Q96RF0 ZSCAN31-202ENST00000396838 3176 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
SNX18Q96RF0 HPRT1-201ENST00000298556 1407 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
SNX18Q96RF0 MBIP-202ENST00000359527 1449 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
SNX18Q96RF0 DCLRE1C-207ENST00000378255 2807 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
SNX18Q96RF0 IPO11-201ENST00000325324 4356 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
SNX18Q96RF0 EYA1-206ENST00000388743 2199 ntAPPRIS ALT1 TSL 5 BASIC9.1□□□□□ -0.95
SNX18Q96RF0 AC092279.2-201ENST00000623742 2189 ntBASIC9.1□□□□□ -0.95
SNX18Q96RF0 NBPF6-202ENST00000495380 2494 ntAPPRIS P2 TSL 5 BASIC9.1□□□□□ -0.95
SNX18Q96RF0 SYNJ1-211ENST00000630077 6898 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
SNX18Q96RF0 ZNF41-201ENST00000313116 4297 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
SNX18Q96RF0 AC021945.1-201ENST00000623964 1650 ntBASIC9.1□□□□□ -0.95
SNX18Q96RF0 TCF4-231ENST00000566279 2128 ntTSL 5 BASIC9.1□□□□□ -0.95
SNX18Q96RF0 NOLC1-207ENST00000488254 2441 ntAPPRIS ALT1 TSL 1 (best) BASIC9.1□□□□□ -0.95
SNX18Q96RF0 C2-201ENST00000299367 2850 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
SNX18Q96RF0 TDRD3-202ENST00000377881 2532 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
SNX18Q96RF0 HSP90B2P-201ENST00000559111 2384 ntBASIC9.09□□□□□ -0.95
SNX18Q96RF0 LINC01258-201ENST00000512517 2059 ntTSL 2 BASIC9.09□□□□□ -0.95
SNX18Q96RF0 OTOR-201ENST00000246081 1477 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
SNX18Q96RF0 RABGGTB-201ENST00000319942 1496 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
SNX18Q96RF0 PSMC1P11-201ENST00000405257 1317 ntBASIC9.09□□□□□ -0.95
SNX18Q96RF0 SEC31A-227ENST00000508502 3801 ntAPPRIS ALT1 TSL 1 (best) BASIC9.09□□□□□ -0.95
SNX18Q96RF0 ADGRG1-203ENST00000540164 3820 ntAPPRIS ALT1 TSL 1 (best) BASIC9.09□□□□□ -0.95
SNX18Q96RF0 NEDD1-203ENST00000429527 3366 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
SNX18Q96RF0 BPTF-203ENST00000335221 2627 ntTSL 5 BASIC9.09□□□□□ -0.95
SNX18Q96RF0 BDNF-216ENST00000532997 3930 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
SNX18Q96RF0 ICE2-213ENST00000561114 3796 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
SNX18Q96RF0 ASCC1-202ENST00000317168 2002 ntAPPRIS P1 TSL 2 BASIC9.09□□□□□ -0.95
SNX18Q96RF0 OR9A4-202ENST00000641559 2018 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
SNX18Q96RF0 MSH5-205ENST00000395853 2704 ntTSL 2 BASIC9.09□□□□□ -0.95
SNX18Q96RF0 DAPP1-203ENST00000512369 1440 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
SNX18Q96RF0 CINP-201ENST00000216756 955 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
SNX18Q96RF0 RRP36-201ENST00000244496 1159 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
SNX18Q96RF0 LYZL4-201ENST00000287748 904 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
SNX18Q96RF0 COA1-202ENST00000310564 1085 ntAPPRIS P3 TSL 2 BASIC9.09□□□□□ -0.95
SNX18Q96RF0 OR56B3P-201ENST00000316517 947 ntBASIC9.09□□□□□ -0.95
SNX18Q96RF0 OR2T12-201ENST00000317996 1066 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
SNX18Q96RF0 AC073957.1-201ENST00000418941 535 ntTSL 3 BASIC9.09□□□□□ -0.95
SNX18Q96RF0 SLC25A5P8-201ENST00000422717 898 ntBASIC9.09□□□□□ -0.95
SNX18Q96RF0 AL365223.1-202ENST00000425027 780 ntBASIC9.09□□□□□ -0.95
SNX18Q96RF0 MOBP-210ENST00000447324 566 ntAPPRIS ALT2 TSL 4 BASIC9.09□□□□□ -0.95
SNX18Q96RF0 AC073135.1-201ENST00000451150 775 ntBASIC9.09□□□□□ -0.95
SNX18Q96RF0 AL356599.1-204ENST00000452617 938 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
SNX18Q96RF0 USP41-202ENST00000454608 1077 ntAPPRIS P5 TSL 5 BASIC9.09□□□□□ -0.95
SNX18Q96RF0 NR1I3-217ENST00000502985 774 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
SNX18Q96RF0 OR10J7P-201ENST00000503933 934 ntBASIC9.09□□□□□ -0.95
SNX18Q96RF0 AC096588.1-201ENST00000504537 558 ntTSL 3 BASIC9.09□□□□□ -0.95
SNX18Q96RF0 AC021148.1-203ENST00000507033 982 ntBASIC9.09□□□□□ -0.95
SNX18Q96RF0 LINC02065-201ENST00000509924 562 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
SNX18Q96RF0 MINCR-201ENST00000517411 645 ntTSL 2 BASIC9.09□□□□□ -0.95
SNX18Q96RF0 CSRP1-207ENST00000526256 582 ntTSL 5 BASIC9.09□□□□□ -0.95
SNX18Q96RF0 AC134684.1-201ENST00000533883 264 ntBASIC9.09□□□□□ -0.95
SNX18Q96RF0 LINC02552-201ENST00000536529 652 ntTSL 3 BASIC9.09□□□□□ -0.95
SNX18Q96RF0 LINC01588-209ENST00000556019 534 ntTSL 3 BASIC9.09□□□□□ -0.95
SNX18Q96RF0 TRAV33-201ENST00000557514 338 ntBASIC9.09□□□□□ -0.95
SNX18Q96RF0 NFATC4-233ENST00000557767 856 ntTSL 3 BASIC9.09□□□□□ -0.95
SNX18Q96RF0 B2M-208ENST00000559916 1081 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
SNX18Q96RF0 AC012317.1-201ENST00000563611 534 ntTSL 4 BASIC9.09□□□□□ -0.95
SNX18Q96RF0 AC007342.3-201ENST00000565598 1218 ntBASIC9.09□□□□□ -0.95
SNX18Q96RF0 Z94057.1-201ENST00000569593 847 ntTSL 3 BASIC9.09□□□□□ -0.95
SNX18Q96RF0 AC123768.3-203ENST00000576873 969 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
SNX18Q96RF0 AC093484.3-201ENST00000578296 449 ntBASIC9.09□□□□□ -0.95
SNX18Q96RF0 AC012572.1-201ENST00000581634 397 ntTSL 2 BASIC9.09□□□□□ -0.95
SNX18Q96RF0 AC024592.2-201ENST00000589276 1188 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
SNX18Q96RF0 ZNF763-205ENST00000592625 582 ntTSL 4 BASIC9.09□□□□□ -0.95
SNX18Q96RF0 ITGA9-AS1-211ENST00000594579 670 ntTSL 2 BASIC9.09□□□□□ -0.95
SNX18Q96RF0 AL021328.1-201ENST00000602674 1291 ntTSL 2 BASIC9.09□□□□□ -0.95
SNX18Q96RF0 CCL15-CCL14-202ENST00000616694 999 ntAPPRIS P1 TSL 2 BASIC9.09□□□□□ -0.95
SNX18Q96RF0 Metazoa_SRP.72-201ENST00000617458 278 ntBASIC9.09□□□□□ -0.95
SNX18Q96RF0 ING4-218ENST00000619641 1280 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
SNX18Q96RF0 ADGRE2-201ENST00000315576 6767 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
SNX18Q96RF0 SYT6-202ENST00000607941 4352 ntTSL 2 BASIC9.09□□□□□ -0.95
SNX18Q96RF0 AC104574.2-201ENST00000559783 1985 ntTSL 3 BASIC9.09□□□□□ -0.95
SNX18Q96RF0 LINC00461-201ENST00000500197 3381 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
SNX18Q96RF0 FAM13A-222ENST00000515600 2206 ntAPPRIS ALT2 TSL 3 BASIC9.09□□□□□ -0.95
SNX18Q96RF0 HLA-DOA-201ENST00000229829 3489 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
SNX18Q96RF0 RGS4-204ENST00000421743 3311 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
SNX18Q96RF0 STK36-202ENST00000392105 4821 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
SNX18Q96RF0 EIF5B-201ENST00000289371 5777 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.95
SNX18Q96RF0 BPNT1-201ENST00000322067 2465 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
SNX18Q96RF0 RFPL4B-201ENST00000441065 1900 ntAPPRIS P1 TSL 2 BASIC9.09□□□□□ -0.95
SNX18Q96RF0 CD36-222ENST00000538969 1922 ntTSL 5 BASIC9.09□□□□□ -0.95
SNX18Q96RF0 CD36-223ENST00000544133 1914 ntTSL 5 BASIC9.09□□□□□ -0.95
SNX18Q96RF0 PDE11A-202ENST00000389683 1781 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
SNX18Q96RF0 GALNTL5-211ENST00000616416 1763 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
SNX18Q96RF0 AC083805.1-201ENST00000499481 3507 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
SNX18Q96RF0 TET3-202ENST00000409262 11388 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
SNX18Q96RF0 TWISTNB-201ENST00000222567 3942 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
SNX18Q96RF0 PDXDC1-210ENST00000563679 2963 ntTSL 2 BASIC9.09□□□□□ -0.95
SNX18Q96RF0 CC2D2A-216ENST00000515124 1474 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
SNX18Q96RF0 LSMEM1-201ENST00000312849 1870 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
SNX18Q96RF0 IL17A-201ENST00000340057 1859 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
SNX18Q96RF0 ST3GAL3-210ENST00000361746 1335 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
SNX18Q96RF0 XKR9-201ENST00000408926 3174 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
SNX18Q96RF0 ABCC11-202ENST00000356608 4612 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
SNX18Q96RF0 CSMD1-202ENST00000400186 10938 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
SNX18Q96RF0 CSMD1-217ENST00000602723 10938 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms