Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 KCNMB3-201ENST00000314235 1485 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
SNX18Q96RF0 SH3GL3-201ENST00000324537 2012 ntTSL 2 BASIC9.11□□□□□ -0.95
SNX18Q96RF0 NF1P9-201ENST00000629326 2008 ntBASIC9.11□□□□□ -0.95
SNX18Q96RF0 RPL19-201ENST00000225430 732 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
SNX18Q96RF0 VN1R4-201ENST00000311170 1048 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
SNX18Q96RF0 HBS1L-201ENST00000314674 980 ntTSL 5 BASIC9.11□□□□□ -0.95
SNX18Q96RF0 KRTAP9-2-201ENST00000377721 1005 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
SNX18Q96RF0 FABP6-201ENST00000393980 756 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
SNX18Q96RF0 RABGAP1L-IT1-201ENST00000414890 737 ntTSL 3 BASIC9.11□□□□□ -0.95
SNX18Q96RF0 DEPDC4-203ENST00000416321 1155 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
SNX18Q96RF0 KIRREL1-IT1-201ENST00000419415 587 ntTSL 2 BASIC9.11□□□□□ -0.95
SNX18Q96RF0 FAM104B-203ENST00000425133 1229 ntAPPRIS ALT2 TSL 2 BASIC9.11□□□□□ -0.95
SNX18Q96RF0 MYCNUT-201ENST00000433810 1039 ntTSL 2 BASIC9.11□□□□□ -0.95
SNX18Q96RF0 ZNF101P2-201ENST00000439152 1229 ntBASIC9.11□□□□□ -0.95
SNX18Q96RF0 PHKA2-AS1-201ENST00000439295 597 ntTSL 3 BASIC9.11□□□□□ -0.95
SNX18Q96RF0 AL590483.1-201ENST00000441338 468 ntTSL 3 BASIC9.11□□□□□ -0.95
SNX18Q96RF0 AL662890.2-201ENST00000457253 709 ntTSL 3 BASIC9.11□□□□□ -0.95
SNX18Q96RF0 RN7SL526P-201ENST00000469492 319 ntBASIC9.11□□□□□ -0.95
SNX18Q96RF0 TM4SF18-203ENST00000470080 907 ntAPPRIS P1 TSL 2 BASIC9.11□□□□□ -0.95
SNX18Q96RF0 AC074276.1-201ENST00000486836 613 ntBASIC9.11□□□□□ -0.95
SNX18Q96RF0 AC007207.1-201ENST00000489396 555 ntBASIC9.11□□□□□ -0.95
SNX18Q96RF0 PARK7-209ENST00000493678 1088 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
SNX18Q96RF0 AC097376.1-202ENST00000512815 657 ntBASIC9.11□□□□□ -0.95
SNX18Q96RF0 SPIDR-205ENST00000518060 482 ntAPPRIS ALT2 TSL 3 BASIC9.11□□□□□ -0.95
SNX18Q96RF0 AC084125.3-201ENST00000529377 398 ntTSL 3 BASIC9.11□□□□□ -0.95
SNX18Q96RF0 CHORDC1-207ENST00000530765 564 ntTSL 4 BASIC9.11□□□□□ -0.95
SNX18Q96RF0 AC011092.1-201ENST00000533128 1047 ntBASIC9.11□□□□□ -0.95
SNX18Q96RF0 AC008014.1-201ENST00000551503 829 ntTSL 3 BASIC9.11□□□□□ -0.95
SNX18Q96RF0 AL049870.2-201ENST00000554389 693 ntTSL 3 BASIC9.11□□□□□ -0.95
SNX18Q96RF0 AL359397.2-201ENST00000555403 446 ntTSL 3 BASIC9.11□□□□□ -0.95
SNX18Q96RF0 CHP1-204ENST00000560397 568 ntTSL 3 BASIC9.11□□□□□ -0.95
SNX18Q96RF0 RPL19-205ENST00000579374 690 ntAPPRIS ALT1 TSL 2 BASIC9.11□□□□□ -0.95
SNX18Q96RF0 RN7SL509P-201ENST00000579670 297 ntBASIC9.11□□□□□ -0.95
SNX18Q96RF0 LINC01387-201ENST00000584361 603 ntTSL 3 BASIC9.11□□□□□ -0.95
SNX18Q96RF0 RN7SL616P-201ENST00000584555 269 ntBASIC9.11□□□□□ -0.95
SNX18Q96RF0 AC005828.4-201ENST00000584608 552 ntTSL 4 BASIC9.11□□□□□ -0.95
SNX18Q96RF0 LINC00907-207ENST00000591381 1291 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
SNX18Q96RF0 OR7E108P-201ENST00000605227 991 ntBASIC9.11□□□□□ -0.95
SNX18Q96RF0 Metazoa_SRP.138-201ENST00000615369 298 ntBASIC9.11□□□□□ -0.95
SNX18Q96RF0 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC9.11□□□□□ -0.95
SNX18Q96RF0 PCAT14-201ENST00000626825 1077 ntTSL 5 BASIC9.11□□□□□ -0.95
SNX18Q96RF0 CD22-201ENST00000085219 3268 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
SNX18Q96RF0 L3MBTL4-202ENST00000400104 4534 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
SNX18Q96RF0 YES1-205ENST00000584307 4639 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
SNX18Q96RF0 GGA3-201ENST00000537686 4069 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
SNX18Q96RF0 SH2D1A-202ENST00000371139 2450 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
SNX18Q96RF0 TLN2-211ENST00000636159 7441 ntTSL 5 BASIC9.11□□□□□ -0.95
SNX18Q96RF0 TUBA1A-202ENST00000301071 1915 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
SNX18Q96RF0 CCDC14-203ENST00000409697 2962 ntAPPRIS ALT2 TSL 2 BASIC9.11□□□□□ -0.95
SNX18Q96RF0 LIN52-205ENST00000555028 2776 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
SNX18Q96RF0 ZNF439-203ENST00000455282 2408 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
SNX18Q96RF0 SLC6A15-211ENST00000552192 2221 ntTSL 2 BASIC9.11□□□□□ -0.95
SNX18Q96RF0 RBM4-206ENST00000483858 1548 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
SNX18Q96RF0 AC008758.1-201ENST00000428311 4505 ntAPPRIS P1 TSL 2 BASIC9.1□□□□□ -0.95
SNX18Q96RF0 SH3YL1-202ENST00000402632 3151 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
SNX18Q96RF0 TRPC2-201ENST00000451043 3173 ntBASIC9.1□□□□□ -0.95
SNX18Q96RF0 TEC-201ENST00000381501 3687 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
SNX18Q96RF0 DGKG-201ENST00000265022 5805 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
SNX18Q96RF0 ZNF317-202ENST00000360385 3955 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
SNX18Q96RF0 FGL1-201ENST00000381840 1335 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
SNX18Q96RF0 LINC01998-201ENST00000464673 1967 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
SNX18Q96RF0 PRPSAP2-205ENST00000419071 1491 ntTSL 2 BASIC9.1□□□□□ -0.95
SNX18Q96RF0 AC090568.2-206ENST00000521936 1469 ntTSL 3 BASIC9.1□□□□□ -0.95
SNX18Q96RF0 SLC6A16-201ENST00000335875 2938 ntAPPRIS P2 TSL 5 BASIC9.1□□□□□ -0.95
SNX18Q96RF0 SYNE1-240ENST00000610489 1754 ntTSL 5 BASIC9.1□□□□□ -0.95
SNX18Q96RF0 BTN2A2-201ENST00000352867 3241 ntTSL 2 BASIC9.1□□□□□ -0.95
SNX18Q96RF0 AC006946.2-201ENST00000608373 2855 ntBASIC9.1□□□□□ -0.95
SNX18Q96RF0 ZSWIM2-201ENST00000295131 2091 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
SNX18Q96RF0 DEFA4-201ENST00000297435 617 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
SNX18Q96RF0 CNN2P12-201ENST00000330492 709 ntBASIC9.1□□□□□ -0.95
SNX18Q96RF0 CRABP2-202ENST00000368221 783 ntAPPRIS P1 TSL 3 BASIC9.1□□□□□ -0.95
SNX18Q96RF0 AL353662.2-201ENST00000372214 645 ntBASIC9.1□□□□□ -0.95
SNX18Q96RF0 ZNF267-202ENST00000394846 680 ntTSL 2 BASIC9.1□□□□□ -0.95
SNX18Q96RF0 ZNF35-203ENST00000399560 564 ntTSL 4 BASIC9.1□□□□□ -0.95
SNX18Q96RF0 RN7SKP8-201ENST00000411037 358 ntBASIC9.1□□□□□ -0.95
SNX18Q96RF0 ZNF847P-201ENST00000412638 1077 ntBASIC9.1□□□□□ -0.95
SNX18Q96RF0 FAM83C-AS1-201ENST00000429167 352 ntTSL 3 BASIC9.1□□□□□ -0.95
SNX18Q96RF0 GAPDHP26-201ENST00000436818 1015 ntBASIC9.1□□□□□ -0.95
SNX18Q96RF0 AC079355.2-201ENST00000440057 190 ntBASIC9.1□□□□□ -0.95
SNX18Q96RF0 TSEN15P2-201ENST00000442453 358 ntBASIC9.1□□□□□ -0.95
SNX18Q96RF0 AC005532.1-203ENST00000447039 626 ntTSL 3 BASIC9.1□□□□□ -0.95
SNX18Q96RF0 AL512594.1-201ENST00000447378 1012 ntBASIC9.1□□□□□ -0.95
SNX18Q96RF0 ZNF35-206ENST00000453164 581 ntTSL 3 BASIC9.1□□□□□ -0.95
SNX18Q96RF0 LINC00963-207ENST00000454635 910 ntTSL 5 BASIC9.1□□□□□ -0.95
SNX18Q96RF0 RPL12P35-201ENST00000477007 496 ntBASIC9.1□□□□□ -0.95
SNX18Q96RF0 ATP5G1-206ENST00000506855 468 ntTSL 3 BASIC9.1□□□□□ -0.95
SNX18Q96RF0 SAP30L-AS1-203ENST00000522312 569 ntTSL 4 BASIC9.1□□□□□ -0.95
SNX18Q96RF0 CSRP1-209ENST00000526723 574 ntTSL 3 BASIC9.1□□□□□ -0.95
SNX18Q96RF0 LINC02206-201ENST00000558436 719 ntTSL 3 BASIC9.1□□□□□ -0.95
SNX18Q96RF0 MIR3689D2-201ENST00000580187 80 ntBASIC9.1□□□□□ -0.95
SNX18Q96RF0 RN7SL383P-201ENST00000581587 294 ntBASIC9.1□□□□□ -0.95
SNX18Q96RF0 AC012309.2-201ENST00000587645 319 ntTSL 3 BASIC9.1□□□□□ -0.95
SNX18Q96RF0 AC011473.3-201ENST00000594910 485 ntTSL 5 BASIC9.1□□□□□ -0.95
SNX18Q96RF0 AL157392.5-201ENST00000601460 1204 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
SNX18Q96RF0 LINC00266-4P-202ENST00000611754 723 ntTSL 5 BASIC9.1□□□□□ -0.95
SNX18Q96RF0 RN7SL536P-201ENST00000612366 290 ntBASIC9.1□□□□□ -0.95
SNX18Q96RF0 RN7SL545P-201ENST00000620547 290 ntBASIC9.1□□□□□ -0.95
SNX18Q96RF0 RN7SL759P-201ENST00000620768 290 ntBASIC9.1□□□□□ -0.95
SNX18Q96RF0 AL096814.1-201ENST00000623004 580 ntAPPRIS ALT2 TSL 3 BASIC9.1□□□□□ -0.95
SNX18Q96RF0 LINC01667-203ENST00000623933 668 ntTSL 2 BASIC9.1□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 134.4 ms