Protein–RNA interactions for Protein: Q6PIF2

SYCE2, Synaptonemal complex central element protein 2, humanhuman

Predictions only

Length 218 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE2Q6PIF2 TLDC1-201ENST00000343629 5046 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
SYCE2Q6PIF2 METTL22-202ENST00000381920 4984 ntAPPRIS P2 TSL 5 BASIC10.39□□□□□ -0.75
SYCE2Q6PIF2 HAP1-202ENST00000341193 3880 ntTSL 2 BASIC10.39□□□□□ -0.75
SYCE2Q6PIF2 OR51S1-201ENST00000322101 1750 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
SYCE2Q6PIF2 CACNA1C-202ENST00000335762 6968 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
SYCE2Q6PIF2 CDC40-202ENST00000368930 1977 ntTSL 2 BASIC10.39□□□□□ -0.75
SYCE2Q6PIF2 HPSE-202ENST00000405413 4652 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SYCE2Q6PIF2 NCF2-204ENST00000418089 2168 ntTSL 2 BASIC10.39□□□□□ -0.75
SYCE2Q6PIF2 YOD1-201ENST00000315927 6265 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SYCE2Q6PIF2 AC027369.1-202ENST00000534734 1330 ntBASIC10.39□□□□□ -0.75
SYCE2Q6PIF2 ERLIN2-206ENST00000519638 1718 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
SYCE2Q6PIF2 PSMD1-203ENST00000409643 2901 ntTSL 5 BASIC10.39□□□□□ -0.75
SYCE2Q6PIF2 AC104024.2-201ENST00000562897 3077 ntBASIC10.39□□□□□ -0.75
SYCE2Q6PIF2 ST3GAL5-257ENST00000640418 2467 ntTSL 5 BASIC10.39□□□□□ -0.75
SYCE2Q6PIF2 CHRNA9-201ENST00000310169 2276 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SYCE2Q6PIF2 TTC25-201ENST00000377540 2255 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SYCE2Q6PIF2 AC020904.2-201ENST00000621646 1669 ntTSL 3 BASIC10.39□□□□□ -0.75
SYCE2Q6PIF2 PCDHGA2-201ENST00000394576 4605 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
SYCE2Q6PIF2 DERL2-201ENST00000158771 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SYCE2Q6PIF2 LCN1P1-201ENST00000372031 505 ntBASIC10.39□□□□□ -0.75
SYCE2Q6PIF2 VSTM1-203ENST00000376626 922 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
SYCE2Q6PIF2 IGHV1-58-201ENST00000390628 414 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
SYCE2Q6PIF2 RPL12P29-201ENST00000425565 457 ntBASIC10.39□□□□□ -0.75
SYCE2Q6PIF2 AL392088.1-201ENST00000428364 670 ntBASIC10.39□□□□□ -0.75
SYCE2Q6PIF2 CHCHD4P2-201ENST00000431135 420 ntBASIC10.39□□□□□ -0.75
SYCE2Q6PIF2 AF130417.1-201ENST00000432412 478 ntTSL 3 BASIC10.39□□□□□ -0.75
SYCE2Q6PIF2 TRAF3IP2-AS1-206ENST00000449449 784 ntTSL 3 BASIC10.39□□□□□ -0.75
SYCE2Q6PIF2 FDPSP2-201ENST00000453932 897 ntBASIC10.39□□□□□ -0.75
SYCE2Q6PIF2 AC099681.1-201ENST00000454777 552 ntTSL 4 BASIC10.39□□□□□ -0.75
SYCE2Q6PIF2 RPL12P42-201ENST00000481802 499 ntBASIC10.39□□□□□ -0.75
SYCE2Q6PIF2 AC106799.2-201ENST00000507435 721 ntTSL 5 BASIC10.39□□□□□ -0.75
SYCE2Q6PIF2 AC021860.1-201ENST00000515436 376 ntTSL 5 BASIC10.39□□□□□ -0.75
SYCE2Q6PIF2 SCARNA16-201ENST00000515981 187 ntBASIC10.39□□□□□ -0.75
SYCE2Q6PIF2 IGLVI-38-201ENST00000519982 385 ntBASIC10.39□□□□□ -0.75
SYCE2Q6PIF2 HNRNPA3P10-201ENST00000547726 1138 ntBASIC10.39□□□□□ -0.75
SYCE2Q6PIF2 OTX2-206ENST00000555006 1279 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SYCE2Q6PIF2 AC009119.1-203ENST00000565064 577 ntTSL 4 BASIC10.39□□□□□ -0.75
SYCE2Q6PIF2 PROCA1-209ENST00000581289 766 ntTSL 3 BASIC10.39□□□□□ -0.75
SYCE2Q6PIF2 MIR4266-201ENST00000583300 55 ntBASIC10.39□□□□□ -0.75
SYCE2Q6PIF2 LINC01764-202ENST00000589310 441 ntTSL 3 BASIC10.39□□□□□ -0.75
SYCE2Q6PIF2 PHBP20-201ENST00000603694 818 ntBASIC10.39□□□□□ -0.75
SYCE2Q6PIF2 RN7SL620P-201ENST00000610816 303 ntBASIC10.39□□□□□ -0.75
SYCE2Q6PIF2 PHBP6-201ENST00000614021 786 ntBASIC10.39□□□□□ -0.75
SYCE2Q6PIF2 Metazoa_SRP.197-201ENST00000618956 303 ntBASIC10.39□□□□□ -0.75
SYCE2Q6PIF2 PLA2G2C-202ENST00000429261 3249 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
SYCE2Q6PIF2 SPATA31D3-201ENST00000445385 4785 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SYCE2Q6PIF2 GJA5-203ENST00000621517 3183 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
SYCE2Q6PIF2 ESR1-202ENST00000338799 3335 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
SYCE2Q6PIF2 SIGLEC10-202ENST00000353836 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
SYCE2Q6PIF2 ASB11-201ENST00000344384 2168 ntTSL 5 BASIC10.39□□□□□ -0.75
SYCE2Q6PIF2 ITGAE-201ENST00000263087 3858 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SYCE2Q6PIF2 BIN2-202ENST00000544402 1990 ntTSL 2 BASIC10.39□□□□□ -0.75
SYCE2Q6PIF2 C17orf77-202ENST00000392620 2525 ntTSL 2 BASIC10.39□□□□□ -0.75
SYCE2Q6PIF2 GLP2R-201ENST00000262441 4572 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SYCE2Q6PIF2 AL590999.1-202ENST00000607215 3053 ntBASIC10.39□□□□□ -0.75
SYCE2Q6PIF2 AC098850.4-201ENST00000448331 8802 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
SYCE2Q6PIF2 HHAT-209ENST00000545781 2864 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
SYCE2Q6PIF2 OPTN-201ENST00000263036 2464 ntAPPRIS P2 TSL 2 BASIC10.39□□□□□ -0.75
SYCE2Q6PIF2 BTBD18-201ENST00000422652 3044 ntAPPRIS P1 TSL 4 BASIC10.39□□□□□ -0.75
SYCE2Q6PIF2 PLAC4-201ENST00000623119 5588 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
SYCE2Q6PIF2 KIAA0825-201ENST00000329378 2262 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SYCE2Q6PIF2 TIA1-205ENST00000433529 4647 ntTSL 2 BASIC10.38□□□□□ -0.75
SYCE2Q6PIF2 KIF5A-201ENST00000286452 3527 ntTSL 2 BASIC10.38□□□□□ -0.75
SYCE2Q6PIF2 ODF2-201ENST00000351030 3899 ntAPPRIS ALT1 TSL 2 BASIC10.38□□□□□ -0.75
SYCE2Q6PIF2 ZNF135-204ENST00000506786 3349 ntTSL 2 BASIC10.38□□□□□ -0.75
SYCE2Q6PIF2 PTPN2-203ENST00000353319 1542 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
SYCE2Q6PIF2 ALDH2-201ENST00000261733 9569 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SYCE2Q6PIF2 AL122035.2-201ENST00000609125 1870 ntBASIC10.38□□□□□ -0.75
SYCE2Q6PIF2 DSTYK-201ENST00000367161 7739 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
SYCE2Q6PIF2 DSTYK-202ENST00000367162 7874 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SYCE2Q6PIF2 Z97633.1-201ENST00000623878 1656 ntBASIC10.38□□□□□ -0.75
SYCE2Q6PIF2 ITGA7-206ENST00000553804 3935 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
SYCE2Q6PIF2 AC027045.3-201ENST00000635215 2884 ntTSL 5 BASIC10.38□□□□□ -0.75
SYCE2Q6PIF2 NAP1L1-216ENST00000549596 1838 ntTSL 2 BASIC10.38□□□□□ -0.75
SYCE2Q6PIF2 CAPN3-205ENST00000357568 2669 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
SYCE2Q6PIF2 PLAA-201ENST00000397292 4234 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SYCE2Q6PIF2 ARID1B-232ENST00000637904 5913 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
SYCE2Q6PIF2 AL590822.2-201ENST00000606533 4196 ntBASIC10.38□□□□□ -0.75
SYCE2Q6PIF2 OR1K1-201ENST00000277309 951 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
SYCE2Q6PIF2 FCHO2-201ENST00000287761 1287 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
SYCE2Q6PIF2 BTG4-201ENST00000356018 1018 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
SYCE2Q6PIF2 RN7SKP72-201ENST00000362327 292 ntBASIC10.38□□□□□ -0.75
SYCE2Q6PIF2 SNORD88C-201ENST00000408061 91 ntBASIC10.38□□□□□ -0.75
SYCE2Q6PIF2 DEPDC4-203ENST00000416321 1155 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
SYCE2Q6PIF2 AC010731.1-201ENST00000426087 846 ntBASIC10.38□□□□□ -0.75
SYCE2Q6PIF2 HNRNPCP9-201ENST00000426952 859 ntBASIC10.38□□□□□ -0.75
SYCE2Q6PIF2 GRPEL2P3-201ENST00000448626 640 ntBASIC10.38□□□□□ -0.75
SYCE2Q6PIF2 AC092610.1-201ENST00000454916 373 ntBASIC10.38□□□□□ -0.75
SYCE2Q6PIF2 COX17-206ENST00000497116 660 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
SYCE2Q6PIF2 VKORC1-208ENST00000498155 870 ntTSL 5 BASIC10.38□□□□□ -0.75
SYCE2Q6PIF2 IFT22-209ENST00000498704 917 ntTSL 2 BASIC10.38□□□□□ -0.75
SYCE2Q6PIF2 LINC00266-2P-201ENST00000509776 454 ntBASIC10.38□□□□□ -0.75
SYCE2Q6PIF2 AC008667.1-201ENST00000515296 568 ntTSL 4 BASIC10.38□□□□□ -0.75
SYCE2Q6PIF2 LINC01485-203ENST00000522571 557 ntTSL 4 BASIC10.38□□□□□ -0.75
SYCE2Q6PIF2 AC130364.1-201ENST00000532682 795 ntBASIC10.38□□□□□ -0.75
SYCE2Q6PIF2 AL136295.2-201ENST00000558478 747 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
SYCE2Q6PIF2 AC005829.1-202ENST00000562555 298 ntBASIC10.38□□□□□ -0.75
SYCE2Q6PIF2 MKRN2OS-203ENST00000564146 985 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
SYCE2Q6PIF2 AC009088.1-201ENST00000565152 833 ntBASIC10.38□□□□□ -0.75
SYCE2Q6PIF2 ARPP19-212ENST00000569281 661 ntAPPRIS P1 TSL 4 BASIC10.38□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms