Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 CAPN11-201ENST00000398776 2728 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SLC1A1P43005 GLA-201ENST00000218516 1318 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SLC1A1P43005 EAPP-201ENST00000250454 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SLC1A1P43005 ACSM6-203ENST00000394005 1592 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
SLC1A1P43005 KCNH6-205ENST00000583023 3821 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
SLC1A1P43005 ZNF469-201ENST00000437464 13203 ntAPPRIS P2 TSL 5 BASIC10.35□□□□□ -0.75
SLC1A1P43005 CNR2-201ENST00000374472 5254 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SLC1A1P43005 SLTM-202ENST00000380516 4147 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
SLC1A1P43005 CACNA2D4-222ENST00000587995 3883 ntTSL 5 BASIC10.35□□□□□ -0.75
SLC1A1P43005 THSD7B-201ENST00000272643 5939 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
SLC1A1P43005 PRB4-201ENST00000279575 916 ntAPPRIS P3 TSL 5 BASIC10.35□□□□□ -0.75
SLC1A1P43005 ZNF669-203ENST00000366501 730 ntTSL 3 BASIC10.35□□□□□ -0.75
SLC1A1P43005 CRABP2-202ENST00000368221 783 ntAPPRIS P1 TSL 3 BASIC10.35□□□□□ -0.75
SLC1A1P43005 PAEP-202ENST00000371766 851 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SLC1A1P43005 AC069281.1-201ENST00000392471 570 ntTSL 4 BASIC10.35□□□□□ -0.75
SLC1A1P43005 MGST1-204ENST00000396209 979 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
SLC1A1P43005 FAM3B-202ENST00000398646 1026 ntTSL 5 BASIC10.35□□□□□ -0.75
SLC1A1P43005 U40455.1-201ENST00000411473 865 ntBASIC10.35□□□□□ -0.75
SLC1A1P43005 HNRNPA1P66-201ENST00000416539 934 ntBASIC10.35□□□□□ -0.75
SLC1A1P43005 PPP1R12BP2-201ENST00000416956 639 ntBASIC10.35□□□□□ -0.75
SLC1A1P43005 NLGN4Y-AS1-201ENST00000434164 532 ntTSL 5 BASIC10.35□□□□□ -0.75
SLC1A1P43005 AL139220.1-201ENST00000436802 520 ntBASIC10.35□□□□□ -0.75
SLC1A1P43005 AC006970.1-201ENST00000442064 389 ntBASIC10.35□□□□□ -0.75
SLC1A1P43005 AC007160.1-201ENST00000488095 319 ntBASIC10.35□□□□□ -0.75
SLC1A1P43005 VN1R46P-201ENST00000519939 850 ntBASIC10.35□□□□□ -0.75
SLC1A1P43005 AC090099.3-201ENST00000524640 979 ntBASIC10.35□□□□□ -0.75
SLC1A1P43005 VPS28-204ENST00000526054 892 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SLC1A1P43005 CKLF-CMTM1-201ENST00000527729 585 ntAPPRIS P3 TSL 2 BASIC10.35□□□□□ -0.75
SLC1A1P43005 COA4-204ENST00000541455 1038 ntTSL 5 BASIC10.35□□□□□ -0.75
SLC1A1P43005 AC091564.7-201ENST00000545572 464 ntTSL 3 BASIC10.35□□□□□ -0.75
SLC1A1P43005 AL049870.1-201ENST00000557196 308 ntBASIC10.35□□□□□ -0.75
SLC1A1P43005 AC013391.1-201ENST00000560477 459 ntTSL 3 BASIC10.35□□□□□ -0.75
SLC1A1P43005 AC009133.1-204ENST00000569809 967 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
SLC1A1P43005 AC090282.2-201ENST00000573526 931 ntBASIC10.35□□□□□ -0.75
SLC1A1P43005 SNHG15-210ENST00000585030 953 ntTSL 3 BASIC10.35□□□□□ -0.75
SLC1A1P43005 ZNF506-207ENST00000587461 831 ntTSL 3 BASIC10.35□□□□□ -0.75
SLC1A1P43005 AC126283.1-201ENST00000609440 364 ntBASIC10.35□□□□□ -0.75
SLC1A1P43005 AC245369.4-201ENST00000632209 353 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
SLC1A1P43005 SRPK2-202ENST00000393651 3650 ntAPPRIS ALT2 TSL 2 BASIC10.35□□□□□ -0.75
SLC1A1P43005 CSTF1-201ENST00000217109 4290 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SLC1A1P43005 ZBTB39-201ENST00000300101 6170 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SLC1A1P43005 ZBTB14-201ENST00000357006 3528 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SLC1A1P43005 TPP1-215ENST00000533371 3536 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
SLC1A1P43005 ZNF169-201ENST00000340911 2336 ntTSL 2 BASIC10.35□□□□□ -0.75
SLC1A1P43005 LYRM7-201ENST00000379380 6351 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SLC1A1P43005 ZNF300-202ENST00000394226 3256 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
SLC1A1P43005 PSEN1-204ENST00000394164 3046 ntAPPRIS ALT1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SLC1A1P43005 ATP7B-205ENST00000418097 4340 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
SLC1A1P43005 SGK1-203ENST00000367857 2414 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
SLC1A1P43005 AP001120.1-201ENST00000561598 3710 ntBASIC10.35□□□□□ -0.75
SLC1A1P43005 GRB2-204ENST00000392563 2851 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
SLC1A1P43005 ADAM32-201ENST00000379907 2601 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SLC1A1P43005 RALGDS-204ENST00000393157 3689 ntAPPRIS ALT2 TSL 2 BASIC10.35□□□□□ -0.75
SLC1A1P43005 ZC4H2-203ENST00000447788 2649 ntTSL 2 BASIC10.35□□□□□ -0.75
SLC1A1P43005 AC020604.1-201ENST00000622979 1909 ntBASIC10.35□□□□□ -0.75
SLC1A1P43005 UBQLN2-201ENST00000338222 4230 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
SLC1A1P43005 ANKRD55-203ENST00000504958 2139 ntTSL 5 BASIC10.34□□□□□ -0.75
SLC1A1P43005 DAB2-217ENST00000545653 4537 ntTSL 5 BASIC10.34□□□□□ -0.75
SLC1A1P43005 PRAMEF30P-201ENST00000438176 1417 ntBASIC10.34□□□□□ -0.75
SLC1A1P43005 ACTG1P9-201ENST00000457622 2658 ntBASIC10.34□□□□□ -0.75
SLC1A1P43005 LSMEM1-201ENST00000312849 1870 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
SLC1A1P43005 PDZK1-205ENST00000451928 1897 ntTSL 2 BASIC10.34□□□□□ -0.75
SLC1A1P43005 TPTE-202ENST00000612746 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
SLC1A1P43005 TPM3-210ENST00000368530 1523 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
SLC1A1P43005 CPA4-210ENST00000493259 1512 ntTSL 2 BASIC10.34□□□□□ -0.75
SLC1A1P43005 C9orf84-202ENST00000374283 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
SLC1A1P43005 AL360294.1-201ENST00000640945 2438 ntBASIC10.34□□□□□ -0.75
SLC1A1P43005 LINC01278-205ENST00000609401 2886 ntTSL 2 BASIC10.34□□□□□ -0.75
SLC1A1P43005 ARHGEF11-202ENST00000368194 6889 ntAPPRIS P4 TSL 1 (best) BASIC10.34□□□□□ -0.75
SLC1A1P43005 SORBS2-209ENST00000418609 5529 ntTSL 2 BASIC10.34□□□□□ -0.75
SLC1A1P43005 IL24-201ENST00000294984 1701 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
SLC1A1P43005 OR6Y1-201ENST00000302617 978 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
SLC1A1P43005 CD300A-201ENST00000310828 631 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
SLC1A1P43005 MANEA-202ENST00000369293 1076 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
SLC1A1P43005 AC073316.1-205ENST00000404626 557 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
SLC1A1P43005 SLC25A20P1-201ENST00000408043 903 ntBASIC10.34□□□□□ -0.75
SLC1A1P43005 U3.38-201ENST00000408534 216 ntBASIC10.34□□□□□ -0.75
SLC1A1P43005 AC092431.1-201ENST00000415342 420 ntTSL 3 BASIC10.34□□□□□ -0.75
SLC1A1P43005 AL353150.1-202ENST00000429700 585 ntTSL 3 BASIC10.34□□□□□ -0.75
SLC1A1P43005 AC004448.3-201ENST00000435953 543 ntTSL 2 BASIC10.34□□□□□ -0.75
SLC1A1P43005 AC079953.1-201ENST00000472008 736 ntBASIC10.34□□□□□ -0.75
SLC1A1P43005 AC021915.2-201ENST00000520496 635 ntTSL 2 BASIC10.34□□□□□ -0.75
SLC1A1P43005 TPT1-AS1-218ENST00000523445 856 ntTSL 5 BASIC10.34□□□□□ -0.75
SLC1A1P43005 TMEM185AP1-201ENST00000524311 546 ntBASIC10.34□□□□□ -0.75
SLC1A1P43005 HTATIP2-205ENST00000530266 713 ntTSL 3 BASIC10.34□□□□□ -0.75
SLC1A1P43005 LINC01982-201ENST00000572848 308 ntTSL 5 BASIC10.34□□□□□ -0.75
SLC1A1P43005 AC125437.1-201ENST00000586389 714 ntBASIC10.34□□□□□ -0.75
SLC1A1P43005 AC011491.3-201ENST00000595644 559 ntTSL 4 BASIC10.34□□□□□ -0.75
SLC1A1P43005 LINC00969-247ENST00000608737 956 ntTSL 5 BASIC10.34□□□□□ -0.75
SLC1A1P43005 SLC25A15P4-201ENST00000614260 289 ntBASIC10.34□□□□□ -0.75
SLC1A1P43005 HNRNPCL2-202ENST00000621994 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
SLC1A1P43005 AC005154.1-207ENST00000625565 597 ntTSL 5 BASIC10.34□□□□□ -0.75
SLC1A1P43005 AC245166.3-201ENST00000636897 257 ntBASIC10.34□□□□□ -0.75
SLC1A1P43005 SYT6-202ENST00000607941 4352 ntTSL 2 BASIC10.34□□□□□ -0.75
SLC1A1P43005 CDH26-201ENST00000244049 1931 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
SLC1A1P43005 NCEH1-205ENST00000538775 4315 ntAPPRIS ALT2 TSL 2 BASIC10.34□□□□□ -0.75
SLC1A1P43005 GPR161-210ENST00000546300 7388 ntTSL 2 BASIC10.34□□□□□ -0.75
SLC1A1P43005 PSG5-205ENST00000404580 2145 ntTSL 2 BASIC10.34□□□□□ -0.75
SLC1A1P43005 LMLN-201ENST00000330198 7043 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
SLC1A1P43005 STAU1-206ENST00000371828 3411 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms