Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 AL050303.2-201ENST00000619798 666 ntBASIC20.36■□□□□ 0.85
PCDHB11Q9Y5F2 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.36■□□□□ 0.85
PCDHB11Q9Y5F2 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHB11Q9Y5F2 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
PCDHB11Q9Y5F2 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
PCDHB11Q9Y5F2 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHB11Q9Y5F2 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHB11Q9Y5F2 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHB11Q9Y5F2 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHB11Q9Y5F2 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHB11Q9Y5F2 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHB11Q9Y5F2 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHB11Q9Y5F2 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.36■□□□□ 0.85
PCDHB11Q9Y5F2 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHB11Q9Y5F2 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
PCDHB11Q9Y5F2 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
PCDHB11Q9Y5F2 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHB11Q9Y5F2 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHB11Q9Y5F2 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHB11Q9Y5F2 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHB11Q9Y5F2 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
PCDHB11Q9Y5F2 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.35■□□□□ 0.85
PCDHB11Q9Y5F2 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHB11Q9Y5F2 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHB11Q9Y5F2 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHB11Q9Y5F2 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
PCDHB11Q9Y5F2 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHB11Q9Y5F2 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHB11Q9Y5F2 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHB11Q9Y5F2 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.35■□□□□ 0.85
PCDHB11Q9Y5F2 FAM201B-201ENST00000458407 597 ntBASIC20.35■□□□□ 0.85
PCDHB11Q9Y5F2 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.35■□□□□ 0.85
PCDHB11Q9Y5F2 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.35■□□□□ 0.85
PCDHB11Q9Y5F2 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.35■□□□□ 0.85
PCDHB11Q9Y5F2 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHB11Q9Y5F2 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHB11Q9Y5F2 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHB11Q9Y5F2 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHB11Q9Y5F2 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHB11Q9Y5F2 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.34■□□□□ 0.85
PCDHB11Q9Y5F2 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHB11Q9Y5F2 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.34■□□□□ 0.85
PCDHB11Q9Y5F2 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
PCDHB11Q9Y5F2 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
PCDHB11Q9Y5F2 SLC7A5P2-201ENST00000553010 536 ntBASIC20.34■□□□□ 0.85
PCDHB11Q9Y5F2 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.34■□□□□ 0.85
PCDHB11Q9Y5F2 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.34■□□□□ 0.85
PCDHB11Q9Y5F2 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHB11Q9Y5F2 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
PCDHB11Q9Y5F2 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHB11Q9Y5F2 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHB11Q9Y5F2 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.34■□□□□ 0.85
PCDHB11Q9Y5F2 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.34■□□□□ 0.85
PCDHB11Q9Y5F2 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PCDHB11Q9Y5F2 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PCDHB11Q9Y5F2 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.33■□□□□ 0.85
PCDHB11Q9Y5F2 POU5F1P4-201ENST00000413175 1085 ntBASIC20.33■□□□□ 0.85
PCDHB11Q9Y5F2 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC20.33■□□□□ 0.85
PCDHB11Q9Y5F2 AF201337.1-201ENST00000520239 748 ntBASIC20.33■□□□□ 0.85
PCDHB11Q9Y5F2 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PCDHB11Q9Y5F2 AC133041.1-202ENST00000642053 222 ntBASIC20.33■□□□□ 0.85
PCDHB11Q9Y5F2 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PCDHB11Q9Y5F2 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PCDHB11Q9Y5F2 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.33■□□□□ 0.84
PCDHB11Q9Y5F2 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
PCDHB11Q9Y5F2 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.33■□□□□ 0.84
PCDHB11Q9Y5F2 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
PCDHB11Q9Y5F2 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHB11Q9Y5F2 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHB11Q9Y5F2 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHB11Q9Y5F2 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
PCDHB11Q9Y5F2 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHB11Q9Y5F2 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHB11Q9Y5F2 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
PCDHB11Q9Y5F2 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.32■□□□□ 0.84
PCDHB11Q9Y5F2 AC120498.10-201ENST00000621827 505 ntBASIC20.32■□□□□ 0.84
PCDHB11Q9Y5F2 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHB11Q9Y5F2 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHB11Q9Y5F2 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
PCDHB11Q9Y5F2 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.32■□□□□ 0.84
PCDHB11Q9Y5F2 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHB11Q9Y5F2 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHB11Q9Y5F2 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
PCDHB11Q9Y5F2 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHB11Q9Y5F2 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.31■□□□□ 0.84
PCDHB11Q9Y5F2 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC20.31■□□□□ 0.84
PCDHB11Q9Y5F2 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHB11Q9Y5F2 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.31■□□□□ 0.84
PCDHB11Q9Y5F2 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHB11Q9Y5F2 AL138781.1-201ENST00000566567 1274 ntBASIC20.31■□□□□ 0.84
PCDHB11Q9Y5F2 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHB11Q9Y5F2 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHB11Q9Y5F2 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHB11Q9Y5F2 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.31■□□□□ 0.84
PCDHB11Q9Y5F2 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.31■□□□□ 0.84
PCDHB11Q9Y5F2 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.31■□□□□ 0.84
PCDHB11Q9Y5F2 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHB11Q9Y5F2 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHB11Q9Y5F2 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.3■□□□□ 0.84
PCDHB11Q9Y5F2 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms