Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
YIPF1Q9Y548 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
YIPF1Q9Y548 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
YIPF1Q9Y548 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
YIPF1Q9Y548 PRORSD1P-201ENST00000295112 541 ntBASIC21.81■■□□□ 1.08
YIPF1Q9Y548 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
YIPF1Q9Y548 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
YIPF1Q9Y548 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
YIPF1Q9Y548 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC21.81■■□□□ 1.08
YIPF1Q9Y548 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
YIPF1Q9Y548 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
YIPF1Q9Y548 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC21.81■■□□□ 1.08
YIPF1Q9Y548 AL589743.5-201ENST00000616611 1050 ntBASIC21.81■■□□□ 1.08
YIPF1Q9Y548 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
YIPF1Q9Y548 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
YIPF1Q9Y548 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
YIPF1Q9Y548 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
YIPF1Q9Y548 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
YIPF1Q9Y548 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
YIPF1Q9Y548 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.8■■□□□ 1.08
YIPF1Q9Y548 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
YIPF1Q9Y548 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
YIPF1Q9Y548 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
YIPF1Q9Y548 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
YIPF1Q9Y548 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
YIPF1Q9Y548 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
YIPF1Q9Y548 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC21.8■■□□□ 1.08
YIPF1Q9Y548 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC21.8■■□□□ 1.08
YIPF1Q9Y548 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC21.8■■□□□ 1.08
YIPF1Q9Y548 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC21.8■■□□□ 1.08
YIPF1Q9Y548 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.8■■□□□ 1.08
YIPF1Q9Y548 ECEL1P1-201ENST00000373592 1742 ntBASIC21.8■■□□□ 1.08
YIPF1Q9Y548 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.8■■□□□ 1.08
YIPF1Q9Y548 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
YIPF1Q9Y548 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.79■■□□□ 1.08
YIPF1Q9Y548 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.79■■□□□ 1.08
YIPF1Q9Y548 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC21.79■■□□□ 1.08
YIPF1Q9Y548 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
YIPF1Q9Y548 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
YIPF1Q9Y548 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC21.79■■□□□ 1.08
YIPF1Q9Y548 NME6-213ENST00000451657 871 ntTSL 2 BASIC21.79■■□□□ 1.08
YIPF1Q9Y548 ADM-205ENST00000528544 586 ntTSL 2 BASIC21.79■■□□□ 1.08
YIPF1Q9Y548 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC21.79■■□□□ 1.08
YIPF1Q9Y548 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
YIPF1Q9Y548 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC21.79■■□□□ 1.08
YIPF1Q9Y548 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
YIPF1Q9Y548 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.79■■□□□ 1.08
YIPF1Q9Y548 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
YIPF1Q9Y548 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.79■■□□□ 1.08
YIPF1Q9Y548 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
YIPF1Q9Y548 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
YIPF1Q9Y548 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
YIPF1Q9Y548 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
YIPF1Q9Y548 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
YIPF1Q9Y548 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
YIPF1Q9Y548 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
YIPF1Q9Y548 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
YIPF1Q9Y548 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21.78■■□□□ 1.08
YIPF1Q9Y548 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
YIPF1Q9Y548 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
YIPF1Q9Y548 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
YIPF1Q9Y548 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
YIPF1Q9Y548 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
YIPF1Q9Y548 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
YIPF1Q9Y548 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
YIPF1Q9Y548 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
YIPF1Q9Y548 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
YIPF1Q9Y548 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
YIPF1Q9Y548 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
YIPF1Q9Y548 CYP21A1P-202ENST00000354927 1481 ntBASIC21.77■■□□□ 1.08
YIPF1Q9Y548 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
YIPF1Q9Y548 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
YIPF1Q9Y548 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC21.77■■□□□ 1.08
YIPF1Q9Y548 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
YIPF1Q9Y548 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
YIPF1Q9Y548 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
YIPF1Q9Y548 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC21.77■■□□□ 1.08
YIPF1Q9Y548 KRT18P68-201ENST00000392293 1000 ntBASIC21.77■■□□□ 1.08
YIPF1Q9Y548 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
YIPF1Q9Y548 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC21.77■■□□□ 1.08
YIPF1Q9Y548 GATS-209ENST00000454084 1030 ntTSL 3 BASIC21.77■■□□□ 1.08
YIPF1Q9Y548 UNC93B5-201ENST00000530315 699 ntBASIC21.77■■□□□ 1.08
YIPF1Q9Y548 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC21.77■■□□□ 1.08
YIPF1Q9Y548 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
YIPF1Q9Y548 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
YIPF1Q9Y548 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
YIPF1Q9Y548 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
YIPF1Q9Y548 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.07
YIPF1Q9Y548 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
YIPF1Q9Y548 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.76■■□□□ 1.07
YIPF1Q9Y548 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
YIPF1Q9Y548 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.76■■□□□ 1.07
YIPF1Q9Y548 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.76■■□□□ 1.07
YIPF1Q9Y548 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
YIPF1Q9Y548 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC21.76■■□□□ 1.07
YIPF1Q9Y548 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC21.76■■□□□ 1.07
YIPF1Q9Y548 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC21.76■■□□□ 1.07
YIPF1Q9Y548 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
YIPF1Q9Y548 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
YIPF1Q9Y548 MMAB-206ENST00000540016 945 ntTSL 3 BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms