Protein–RNA interactions for Protein: Q9Y4K3

TRAF6, TNF receptor-associated factor 6, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF6Q9Y4K3 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
TRAF6Q9Y4K3 AC099791.1-201ENST00000416440 715 ntBASIC20.22■□□□□ 0.83
TRAF6Q9Y4K3 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
TRAF6Q9Y4K3 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TRAF6Q9Y4K3 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.22■□□□□ 0.83
TRAF6Q9Y4K3 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.22■□□□□ 0.83
TRAF6Q9Y4K3 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
TRAF6Q9Y4K3 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.22■□□□□ 0.83
TRAF6Q9Y4K3 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRAF6Q9Y4K3 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.22■□□□□ 0.83
TRAF6Q9Y4K3 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.22■□□□□ 0.83
TRAF6Q9Y4K3 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRAF6Q9Y4K3 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TRAF6Q9Y4K3 TSPY26P-201ENST00000476365 1326 ntBASIC20.22■□□□□ 0.83
TRAF6Q9Y4K3 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.22■□□□□ 0.83
TRAF6Q9Y4K3 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TRAF6Q9Y4K3 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.22■□□□□ 0.83
TRAF6Q9Y4K3 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.22■□□□□ 0.83
TRAF6Q9Y4K3 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRAF6Q9Y4K3 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.21■□□□□ 0.83
TRAF6Q9Y4K3 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TRAF6Q9Y4K3 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.21■□□□□ 0.83
TRAF6Q9Y4K3 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.21■□□□□ 0.83
TRAF6Q9Y4K3 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRAF6Q9Y4K3 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
TRAF6Q9Y4K3 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
TRAF6Q9Y4K3 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
TRAF6Q9Y4K3 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.21■□□□□ 0.83
TRAF6Q9Y4K3 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TRAF6Q9Y4K3 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRAF6Q9Y4K3 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
TRAF6Q9Y4K3 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.2■□□□□ 0.82
TRAF6Q9Y4K3 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRAF6Q9Y4K3 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.2■□□□□ 0.82
TRAF6Q9Y4K3 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
TRAF6Q9Y4K3 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRAF6Q9Y4K3 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRAF6Q9Y4K3 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRAF6Q9Y4K3 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRAF6Q9Y4K3 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.2■□□□□ 0.82
TRAF6Q9Y4K3 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.2■□□□□ 0.82
TRAF6Q9Y4K3 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.2■□□□□ 0.82
TRAF6Q9Y4K3 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
TRAF6Q9Y4K3 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.2■□□□□ 0.82
TRAF6Q9Y4K3 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRAF6Q9Y4K3 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TRAF6Q9Y4K3 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRAF6Q9Y4K3 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRAF6Q9Y4K3 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.2■□□□□ 0.82
TRAF6Q9Y4K3 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
TRAF6Q9Y4K3 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRAF6Q9Y4K3 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRAF6Q9Y4K3 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
TRAF6Q9Y4K3 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
TRAF6Q9Y4K3 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.19■□□□□ 0.82
TRAF6Q9Y4K3 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TRAF6Q9Y4K3 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TRAF6Q9Y4K3 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.19■□□□□ 0.82
TRAF6Q9Y4K3 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
TRAF6Q9Y4K3 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.19■□□□□ 0.82
TRAF6Q9Y4K3 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRAF6Q9Y4K3 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.19■□□□□ 0.82
TRAF6Q9Y4K3 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.19■□□□□ 0.82
TRAF6Q9Y4K3 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.19■□□□□ 0.82
TRAF6Q9Y4K3 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.19■□□□□ 0.82
TRAF6Q9Y4K3 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
TRAF6Q9Y4K3 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRAF6Q9Y4K3 AC020907.5-201ENST00000624372 1936 ntBASIC20.19■□□□□ 0.82
TRAF6Q9Y4K3 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRAF6Q9Y4K3 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
TRAF6Q9Y4K3 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.19■□□□□ 0.82
TRAF6Q9Y4K3 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
TRAF6Q9Y4K3 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
TRAF6Q9Y4K3 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRAF6Q9Y4K3 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
TRAF6Q9Y4K3 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRAF6Q9Y4K3 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TRAF6Q9Y4K3 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TRAF6Q9Y4K3 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRAF6Q9Y4K3 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRAF6Q9Y4K3 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRAF6Q9Y4K3 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TRAF6Q9Y4K3 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRAF6Q9Y4K3 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
TRAF6Q9Y4K3 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRAF6Q9Y4K3 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.18■□□□□ 0.82
TRAF6Q9Y4K3 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.18■□□□□ 0.82
TRAF6Q9Y4K3 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
TRAF6Q9Y4K3 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.18■□□□□ 0.82
TRAF6Q9Y4K3 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TRAF6Q9Y4K3 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRAF6Q9Y4K3 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRAF6Q9Y4K3 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.18■□□□□ 0.82
TRAF6Q9Y4K3 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRAF6Q9Y4K3 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.18■□□□□ 0.82
TRAF6Q9Y4K3 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRAF6Q9Y4K3 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.18■□□□□ 0.82
TRAF6Q9Y4K3 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRAF6Q9Y4K3 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.17■□□□□ 0.82
TRAF6Q9Y4K3 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms