Protein–RNA interactions for Protein: Q9Y3B2

EXOSC1, Exosome complex component CSL4, humanhuman

Known RBP Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1Q9Y3B2 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
EXOSC1Q9Y3B2 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC18.59■□□□□ 0.57
EXOSC1Q9Y3B2 AL162377.1-201ENST00000618844 1793 ntBASIC18.59■□□□□ 0.57
EXOSC1Q9Y3B2 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
EXOSC1Q9Y3B2 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
EXOSC1Q9Y3B2 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
EXOSC1Q9Y3B2 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.59■□□□□ 0.57
EXOSC1Q9Y3B2 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
EXOSC1Q9Y3B2 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.58■□□□□ 0.57
EXOSC1Q9Y3B2 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
EXOSC1Q9Y3B2 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.58■□□□□ 0.57
EXOSC1Q9Y3B2 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
EXOSC1Q9Y3B2 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.58■□□□□ 0.57
EXOSC1Q9Y3B2 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
EXOSC1Q9Y3B2 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.58■□□□□ 0.56
EXOSC1Q9Y3B2 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
EXOSC1Q9Y3B2 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC18.58■□□□□ 0.56
EXOSC1Q9Y3B2 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
EXOSC1Q9Y3B2 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
EXOSC1Q9Y3B2 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
EXOSC1Q9Y3B2 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
EXOSC1Q9Y3B2 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
EXOSC1Q9Y3B2 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
EXOSC1Q9Y3B2 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.58■□□□□ 0.56
EXOSC1Q9Y3B2 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.58■□□□□ 0.56
EXOSC1Q9Y3B2 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
EXOSC1Q9Y3B2 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.57■□□□□ 0.56
EXOSC1Q9Y3B2 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.57■□□□□ 0.56
EXOSC1Q9Y3B2 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.57■□□□□ 0.56
EXOSC1Q9Y3B2 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
EXOSC1Q9Y3B2 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
EXOSC1Q9Y3B2 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
EXOSC1Q9Y3B2 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.57■□□□□ 0.56
EXOSC1Q9Y3B2 UNC93B8-201ENST00000511903 705 ntBASIC18.57■□□□□ 0.56
EXOSC1Q9Y3B2 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC18.57■□□□□ 0.56
EXOSC1Q9Y3B2 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
EXOSC1Q9Y3B2 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC18.57■□□□□ 0.56
EXOSC1Q9Y3B2 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC18.57■□□□□ 0.56
EXOSC1Q9Y3B2 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
EXOSC1Q9Y3B2 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
EXOSC1Q9Y3B2 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
EXOSC1Q9Y3B2 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
EXOSC1Q9Y3B2 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.57■□□□□ 0.56
EXOSC1Q9Y3B2 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
EXOSC1Q9Y3B2 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
EXOSC1Q9Y3B2 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
EXOSC1Q9Y3B2 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.56■□□□□ 0.56
EXOSC1Q9Y3B2 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
EXOSC1Q9Y3B2 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.56■□□□□ 0.56
EXOSC1Q9Y3B2 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
EXOSC1Q9Y3B2 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
EXOSC1Q9Y3B2 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC18.56■□□□□ 0.56
EXOSC1Q9Y3B2 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC18.56■□□□□ 0.56
EXOSC1Q9Y3B2 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC18.56■□□□□ 0.56
EXOSC1Q9Y3B2 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
EXOSC1Q9Y3B2 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
EXOSC1Q9Y3B2 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
EXOSC1Q9Y3B2 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
EXOSC1Q9Y3B2 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
EXOSC1Q9Y3B2 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
EXOSC1Q9Y3B2 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
EXOSC1Q9Y3B2 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.55■□□□□ 0.56
EXOSC1Q9Y3B2 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
EXOSC1Q9Y3B2 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
EXOSC1Q9Y3B2 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
EXOSC1Q9Y3B2 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
EXOSC1Q9Y3B2 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
EXOSC1Q9Y3B2 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
EXOSC1Q9Y3B2 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
EXOSC1Q9Y3B2 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
EXOSC1Q9Y3B2 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
EXOSC1Q9Y3B2 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
EXOSC1Q9Y3B2 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
EXOSC1Q9Y3B2 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
EXOSC1Q9Y3B2 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
EXOSC1Q9Y3B2 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC18.55■□□□□ 0.56
EXOSC1Q9Y3B2 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
EXOSC1Q9Y3B2 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
EXOSC1Q9Y3B2 AL512408.1-201ENST00000569378 2000 ntBASIC18.55■□□□□ 0.56
EXOSC1Q9Y3B2 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
EXOSC1Q9Y3B2 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
EXOSC1Q9Y3B2 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
EXOSC1Q9Y3B2 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
EXOSC1Q9Y3B2 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
EXOSC1Q9Y3B2 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
EXOSC1Q9Y3B2 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
EXOSC1Q9Y3B2 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
EXOSC1Q9Y3B2 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
EXOSC1Q9Y3B2 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
EXOSC1Q9Y3B2 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
EXOSC1Q9Y3B2 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC18.54■□□□□ 0.56
EXOSC1Q9Y3B2 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC18.54■□□□□ 0.56
EXOSC1Q9Y3B2 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
EXOSC1Q9Y3B2 AL356740.2-201ENST00000601559 647 ntBASIC18.54■□□□□ 0.56
EXOSC1Q9Y3B2 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC18.54■□□□□ 0.56
EXOSC1Q9Y3B2 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
EXOSC1Q9Y3B2 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.54■□□□□ 0.56
EXOSC1Q9Y3B2 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
EXOSC1Q9Y3B2 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
EXOSC1Q9Y3B2 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms