Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RPH3AQ9Y2J0 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RPH3AQ9Y2J0 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RPH3AQ9Y2J0 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.02■□□□□ 0.64
RPH3AQ9Y2J0 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.02■□□□□ 0.64
RPH3AQ9Y2J0 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
RPH3AQ9Y2J0 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.02■□□□□ 0.63
RPH3AQ9Y2J0 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
RPH3AQ9Y2J0 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
RPH3AQ9Y2J0 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.02■□□□□ 0.63
RPH3AQ9Y2J0 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
RPH3AQ9Y2J0 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RPH3AQ9Y2J0 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RPH3AQ9Y2J0 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
RPH3AQ9Y2J0 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
RPH3AQ9Y2J0 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RPH3AQ9Y2J0 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.01■□□□□ 0.63
RPH3AQ9Y2J0 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RPH3AQ9Y2J0 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.01■□□□□ 0.63
RPH3AQ9Y2J0 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.01■□□□□ 0.63
RPH3AQ9Y2J0 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RPH3AQ9Y2J0 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RPH3AQ9Y2J0 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.01■□□□□ 0.63
RPH3AQ9Y2J0 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RPH3AQ9Y2J0 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RPH3AQ9Y2J0 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
RPH3AQ9Y2J0 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.01■□□□□ 0.63
RPH3AQ9Y2J0 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.01■□□□□ 0.63
RPH3AQ9Y2J0 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RPH3AQ9Y2J0 TMEM191A-211ENST00000637163 1067 ntBASIC19.01■□□□□ 0.63
RPH3AQ9Y2J0 AC073111.5-205ENST00000641717 521 ntBASIC19.01■□□□□ 0.63
RPH3AQ9Y2J0 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RPH3AQ9Y2J0 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
RPH3AQ9Y2J0 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.01■□□□□ 0.63
RPH3AQ9Y2J0 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RPH3AQ9Y2J0 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RPH3AQ9Y2J0 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RPH3AQ9Y2J0 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
RPH3AQ9Y2J0 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RPH3AQ9Y2J0 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19■□□□□ 0.63
RPH3AQ9Y2J0 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
RPH3AQ9Y2J0 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RPH3AQ9Y2J0 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
RPH3AQ9Y2J0 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RPH3AQ9Y2J0 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
RPH3AQ9Y2J0 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19■□□□□ 0.63
RPH3AQ9Y2J0 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19■□□□□ 0.63
RPH3AQ9Y2J0 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19■□□□□ 0.63
RPH3AQ9Y2J0 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
RPH3AQ9Y2J0 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19■□□□□ 0.63
RPH3AQ9Y2J0 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RPH3AQ9Y2J0 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
RPH3AQ9Y2J0 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RPH3AQ9Y2J0 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19■□□□□ 0.63
RPH3AQ9Y2J0 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
RPH3AQ9Y2J0 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
RPH3AQ9Y2J0 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
RPH3AQ9Y2J0 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RPH3AQ9Y2J0 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
RPH3AQ9Y2J0 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RPH3AQ9Y2J0 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC18.99■□□□□ 0.63
RPH3AQ9Y2J0 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RPH3AQ9Y2J0 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RPH3AQ9Y2J0 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RPH3AQ9Y2J0 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RPH3AQ9Y2J0 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.99■□□□□ 0.63
RPH3AQ9Y2J0 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.99■□□□□ 0.63
RPH3AQ9Y2J0 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.99■□□□□ 0.63
RPH3AQ9Y2J0 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC18.99■□□□□ 0.63
RPH3AQ9Y2J0 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RPH3AQ9Y2J0 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RPH3AQ9Y2J0 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC18.99■□□□□ 0.63
RPH3AQ9Y2J0 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RPH3AQ9Y2J0 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
RPH3AQ9Y2J0 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RPH3AQ9Y2J0 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.99■□□□□ 0.63
RPH3AQ9Y2J0 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RPH3AQ9Y2J0 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RPH3AQ9Y2J0 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RPH3AQ9Y2J0 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
RPH3AQ9Y2J0 CDCA4P2-201ENST00000441182 718 ntBASIC18.98■□□□□ 0.63
RPH3AQ9Y2J0 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.98■□□□□ 0.63
RPH3AQ9Y2J0 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.98■□□□□ 0.63
RPH3AQ9Y2J0 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
RPH3AQ9Y2J0 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.98■□□□□ 0.63
RPH3AQ9Y2J0 AC010536.3-201ENST00000620306 533 ntBASIC18.98■□□□□ 0.63
RPH3AQ9Y2J0 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.98■□□□□ 0.63
RPH3AQ9Y2J0 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RPH3AQ9Y2J0 KRT16P2-201ENST00000414673 1423 ntBASIC18.98■□□□□ 0.63
RPH3AQ9Y2J0 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RPH3AQ9Y2J0 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RPH3AQ9Y2J0 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
RPH3AQ9Y2J0 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
RPH3AQ9Y2J0 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RPH3AQ9Y2J0 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RPH3AQ9Y2J0 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RPH3AQ9Y2J0 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.97■□□□□ 0.63
RPH3AQ9Y2J0 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RPH3AQ9Y2J0 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
RPH3AQ9Y2J0 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms