Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 PFKL-212ENST00000628044 129 ntTSL 3 BASIC21.2■□□□□ 0.98
FNDC3AQ9Y2H6 PARP1-210ENST00000629232 477 ntTSL 5 BASIC21.2■□□□□ 0.98
FNDC3AQ9Y2H6 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
FNDC3AQ9Y2H6 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
FNDC3AQ9Y2H6 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
FNDC3AQ9Y2H6 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.2■□□□□ 0.98
FNDC3AQ9Y2H6 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
FNDC3AQ9Y2H6 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
FNDC3AQ9Y2H6 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
FNDC3AQ9Y2H6 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
FNDC3AQ9Y2H6 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
FNDC3AQ9Y2H6 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.19■□□□□ 0.98
FNDC3AQ9Y2H6 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
FNDC3AQ9Y2H6 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
FNDC3AQ9Y2H6 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
FNDC3AQ9Y2H6 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.19■□□□□ 0.98
FNDC3AQ9Y2H6 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
FNDC3AQ9Y2H6 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
FNDC3AQ9Y2H6 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
FNDC3AQ9Y2H6 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
FNDC3AQ9Y2H6 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
FNDC3AQ9Y2H6 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC21.19■□□□□ 0.98
FNDC3AQ9Y2H6 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.19■□□□□ 0.98
FNDC3AQ9Y2H6 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
FNDC3AQ9Y2H6 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
FNDC3AQ9Y2H6 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.19■□□□□ 0.98
FNDC3AQ9Y2H6 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC21.19■□□□□ 0.98
FNDC3AQ9Y2H6 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
FNDC3AQ9Y2H6 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.19■□□□□ 0.98
FNDC3AQ9Y2H6 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
FNDC3AQ9Y2H6 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
FNDC3AQ9Y2H6 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
FNDC3AQ9Y2H6 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
FNDC3AQ9Y2H6 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
FNDC3AQ9Y2H6 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
FNDC3AQ9Y2H6 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
FNDC3AQ9Y2H6 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC21.18■□□□□ 0.98
FNDC3AQ9Y2H6 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
FNDC3AQ9Y2H6 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
FNDC3AQ9Y2H6 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
FNDC3AQ9Y2H6 MFF-207ENST00000409565 1548 ntTSL 2 BASIC21.18■□□□□ 0.98
FNDC3AQ9Y2H6 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC21.18■□□□□ 0.98
FNDC3AQ9Y2H6 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
FNDC3AQ9Y2H6 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
FNDC3AQ9Y2H6 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
FNDC3AQ9Y2H6 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
FNDC3AQ9Y2H6 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
FNDC3AQ9Y2H6 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
FNDC3AQ9Y2H6 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
FNDC3AQ9Y2H6 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
FNDC3AQ9Y2H6 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC21.17■□□□□ 0.98
FNDC3AQ9Y2H6 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.17■□□□□ 0.98
FNDC3AQ9Y2H6 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC21.17■□□□□ 0.98
FNDC3AQ9Y2H6 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
FNDC3AQ9Y2H6 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
FNDC3AQ9Y2H6 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
FNDC3AQ9Y2H6 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
FNDC3AQ9Y2H6 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
FNDC3AQ9Y2H6 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
FNDC3AQ9Y2H6 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.16■□□□□ 0.98
FNDC3AQ9Y2H6 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
FNDC3AQ9Y2H6 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
FNDC3AQ9Y2H6 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21.16■□□□□ 0.98
FNDC3AQ9Y2H6 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
FNDC3AQ9Y2H6 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC21.16■□□□□ 0.98
FNDC3AQ9Y2H6 AC069152.1-201ENST00000438030 544 ntBASIC21.16■□□□□ 0.98
FNDC3AQ9Y2H6 CNN2P6-201ENST00000439038 900 ntBASIC21.16■□□□□ 0.98
FNDC3AQ9Y2H6 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
FNDC3AQ9Y2H6 SERP1-208ENST00000491660 830 ntTSL 2 BASIC21.16■□□□□ 0.98
FNDC3AQ9Y2H6 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC21.16■□□□□ 0.98
FNDC3AQ9Y2H6 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC21.16■□□□□ 0.98
FNDC3AQ9Y2H6 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.16■□□□□ 0.98
FNDC3AQ9Y2H6 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.16■□□□□ 0.98
FNDC3AQ9Y2H6 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
FNDC3AQ9Y2H6 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
FNDC3AQ9Y2H6 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
FNDC3AQ9Y2H6 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
FNDC3AQ9Y2H6 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
FNDC3AQ9Y2H6 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
FNDC3AQ9Y2H6 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
FNDC3AQ9Y2H6 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
FNDC3AQ9Y2H6 AC007375.3-201ENST00000600936 2314 ntBASIC21.15■□□□□ 0.98
FNDC3AQ9Y2H6 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC21.15■□□□□ 0.98
FNDC3AQ9Y2H6 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
FNDC3AQ9Y2H6 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
FNDC3AQ9Y2H6 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC21.15■□□□□ 0.98
FNDC3AQ9Y2H6 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
FNDC3AQ9Y2H6 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
FNDC3AQ9Y2H6 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
FNDC3AQ9Y2H6 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
FNDC3AQ9Y2H6 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
FNDC3AQ9Y2H6 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
FNDC3AQ9Y2H6 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.14■□□□□ 0.97
FNDC3AQ9Y2H6 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
FNDC3AQ9Y2H6 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC21.14■□□□□ 0.97
FNDC3AQ9Y2H6 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC21.14■□□□□ 0.97
FNDC3AQ9Y2H6 RGMA-211ENST00000557420 989 ntTSL 3 BASIC21.14■□□□□ 0.97
FNDC3AQ9Y2H6 AC098934.4-201ENST00000564127 592 ntBASIC21.14■□□□□ 0.97
FNDC3AQ9Y2H6 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
FNDC3AQ9Y2H6 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms