Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF6Q9Y252 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
RNF6Q9Y252 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF6Q9Y252 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RNF6Q9Y252 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
RNF6Q9Y252 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.5■□□□□ 0.71
RNF6Q9Y252 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.5■□□□□ 0.71
RNF6Q9Y252 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF6Q9Y252 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF6Q9Y252 FEM1AP1-201ENST00000431297 1995 ntBASIC19.5■□□□□ 0.71
RNF6Q9Y252 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF6Q9Y252 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF6Q9Y252 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF6Q9Y252 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RNF6Q9Y252 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
RNF6Q9Y252 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
RNF6Q9Y252 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF6Q9Y252 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF6Q9Y252 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RNF6Q9Y252 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF6Q9Y252 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.49■□□□□ 0.71
RNF6Q9Y252 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.49■□□□□ 0.71
RNF6Q9Y252 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.49■□□□□ 0.71
RNF6Q9Y252 KRT18P61-201ENST00000585825 1298 ntBASIC19.49■□□□□ 0.71
RNF6Q9Y252 TPRG1LP1-201ENST00000598702 760 ntBASIC19.49■□□□□ 0.71
RNF6Q9Y252 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.49■□□□□ 0.71
RNF6Q9Y252 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
RNF6Q9Y252 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF6Q9Y252 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF6Q9Y252 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.49■□□□□ 0.71
RNF6Q9Y252 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF6Q9Y252 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
RNF6Q9Y252 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
RNF6Q9Y252 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RNF6Q9Y252 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.48■□□□□ 0.71
RNF6Q9Y252 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.48■□□□□ 0.71
RNF6Q9Y252 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RNF6Q9Y252 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RNF6Q9Y252 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RNF6Q9Y252 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.48■□□□□ 0.71
RNF6Q9Y252 AC016769.1-201ENST00000409132 1010 ntBASIC19.48■□□□□ 0.71
RNF6Q9Y252 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.48■□□□□ 0.71
RNF6Q9Y252 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.48■□□□□ 0.71
RNF6Q9Y252 AC137761.2-201ENST00000561729 223 ntBASIC19.48■□□□□ 0.71
RNF6Q9Y252 AC145350.3-201ENST00000569033 163 ntBASIC19.48■□□□□ 0.71
RNF6Q9Y252 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.48■□□□□ 0.71
RNF6Q9Y252 AC080038.1-201ENST00000611274 1154 ntBASIC19.48■□□□□ 0.71
RNF6Q9Y252 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
RNF6Q9Y252 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
RNF6Q9Y252 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RNF6Q9Y252 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RNF6Q9Y252 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RNF6Q9Y252 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RNF6Q9Y252 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RNF6Q9Y252 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.47■□□□□ 0.71
RNF6Q9Y252 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RNF6Q9Y252 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
RNF6Q9Y252 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RNF6Q9Y252 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
RNF6Q9Y252 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.47■□□□□ 0.71
RNF6Q9Y252 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.47■□□□□ 0.71
RNF6Q9Y252 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.47■□□□□ 0.71
RNF6Q9Y252 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RNF6Q9Y252 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RNF6Q9Y252 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
RNF6Q9Y252 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RNF6Q9Y252 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
RNF6Q9Y252 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.47■□□□□ 0.71
RNF6Q9Y252 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RNF6Q9Y252 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNF6Q9Y252 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNF6Q9Y252 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNF6Q9Y252 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNF6Q9Y252 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNF6Q9Y252 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.46■□□□□ 0.71
RNF6Q9Y252 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
RNF6Q9Y252 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNF6Q9Y252 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.46■□□□□ 0.71
RNF6Q9Y252 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNF6Q9Y252 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RNF6Q9Y252 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
RNF6Q9Y252 AC006015.1-201ENST00000429970 570 ntBASIC19.46■□□□□ 0.71
RNF6Q9Y252 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.46■□□□□ 0.71
RNF6Q9Y252 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.46■□□□□ 0.71
RNF6Q9Y252 AC068587.7-201ENST00000641602 218 ntBASIC19.46■□□□□ 0.71
RNF6Q9Y252 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
RNF6Q9Y252 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNF6Q9Y252 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
RNF6Q9Y252 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.46■□□□□ 0.71
RNF6Q9Y252 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.46■□□□□ 0.71
RNF6Q9Y252 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.46■□□□□ 0.71
RNF6Q9Y252 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.46■□□□□ 0.71
RNF6Q9Y252 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RNF6Q9Y252 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.45■□□□□ 0.7
RNF6Q9Y252 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RNF6Q9Y252 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RNF6Q9Y252 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.45■□□□□ 0.7
RNF6Q9Y252 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RNF6Q9Y252 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.45■□□□□ 0.7
RNF6Q9Y252 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms