Protein–RNA interactions for Protein: Q9UJK0

TSR3, Ribosome biogenesis protein TSR3 homolog, humanhuman

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSR3Q9UJK0 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.59■□□□□ 0.89
TSR3Q9UJK0 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TSR3Q9UJK0 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TSR3Q9UJK0 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TSR3Q9UJK0 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TSR3Q9UJK0 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.59■□□□□ 0.89
TSR3Q9UJK0 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
TSR3Q9UJK0 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TSR3Q9UJK0 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
TSR3Q9UJK0 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TSR3Q9UJK0 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TSR3Q9UJK0 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
TSR3Q9UJK0 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
TSR3Q9UJK0 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.58■□□□□ 0.89
TSR3Q9UJK0 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
TSR3Q9UJK0 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TSR3Q9UJK0 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.58■□□□□ 0.89
TSR3Q9UJK0 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TSR3Q9UJK0 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TSR3Q9UJK0 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TSR3Q9UJK0 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.58■□□□□ 0.89
TSR3Q9UJK0 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.58■□□□□ 0.89
TSR3Q9UJK0 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.58■□□□□ 0.89
TSR3Q9UJK0 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
TSR3Q9UJK0 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TSR3Q9UJK0 AC097381.1-201ENST00000429019 1296 ntBASIC20.58■□□□□ 0.89
TSR3Q9UJK0 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.58■□□□□ 0.89
TSR3Q9UJK0 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.58■□□□□ 0.89
TSR3Q9UJK0 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC20.58■□□□□ 0.89
TSR3Q9UJK0 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.58■□□□□ 0.89
TSR3Q9UJK0 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC20.58■□□□□ 0.89
TSR3Q9UJK0 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TSR3Q9UJK0 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TSR3Q9UJK0 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TSR3Q9UJK0 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TSR3Q9UJK0 AP004607.4-201ENST00000530158 1459 ntBASIC20.57■□□□□ 0.88
TSR3Q9UJK0 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.57■□□□□ 0.88
TSR3Q9UJK0 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.57■□□□□ 0.88
TSR3Q9UJK0 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
TSR3Q9UJK0 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TSR3Q9UJK0 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TSR3Q9UJK0 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
TSR3Q9UJK0 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TSR3Q9UJK0 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TSR3Q9UJK0 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.57■□□□□ 0.88
TSR3Q9UJK0 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.57■□□□□ 0.88
TSR3Q9UJK0 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.57■□□□□ 0.88
TSR3Q9UJK0 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.57■□□□□ 0.88
TSR3Q9UJK0 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
TSR3Q9UJK0 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
TSR3Q9UJK0 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.57■□□□□ 0.88
TSR3Q9UJK0 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
TSR3Q9UJK0 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TSR3Q9UJK0 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TSR3Q9UJK0 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TSR3Q9UJK0 AL049796.1-201ENST00000565336 1766 ntBASIC20.57■□□□□ 0.88
TSR3Q9UJK0 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.56■□□□□ 0.88
TSR3Q9UJK0 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TSR3Q9UJK0 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TSR3Q9UJK0 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.56■□□□□ 0.88
TSR3Q9UJK0 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TSR3Q9UJK0 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TSR3Q9UJK0 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TSR3Q9UJK0 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TSR3Q9UJK0 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.56■□□□□ 0.88
TSR3Q9UJK0 MIR935-201ENST00000401179 91 ntBASIC20.56■□□□□ 0.88
TSR3Q9UJK0 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TSR3Q9UJK0 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.56■□□□□ 0.88
TSR3Q9UJK0 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
TSR3Q9UJK0 AP001160.3-201ENST00000601484 763 ntBASIC20.56■□□□□ 0.88
TSR3Q9UJK0 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20.56■□□□□ 0.88
TSR3Q9UJK0 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
TSR3Q9UJK0 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TSR3Q9UJK0 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
TSR3Q9UJK0 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TSR3Q9UJK0 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TSR3Q9UJK0 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TSR3Q9UJK0 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TSR3Q9UJK0 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TSR3Q9UJK0 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TSR3Q9UJK0 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.55■□□□□ 0.88
TSR3Q9UJK0 AC026271.2-201ENST00000428091 497 ntBASIC20.55■□□□□ 0.88
TSR3Q9UJK0 SLC7A5P2-201ENST00000553010 536 ntBASIC20.55■□□□□ 0.88
TSR3Q9UJK0 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.55■□□□□ 0.88
TSR3Q9UJK0 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.55■□□□□ 0.88
TSR3Q9UJK0 MIR6821-201ENST00000617625 74 ntBASIC20.55■□□□□ 0.88
TSR3Q9UJK0 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.55■□□□□ 0.88
TSR3Q9UJK0 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.55■□□□□ 0.88
TSR3Q9UJK0 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
TSR3Q9UJK0 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TSR3Q9UJK0 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
TSR3Q9UJK0 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.55■□□□□ 0.88
TSR3Q9UJK0 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TSR3Q9UJK0 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TSR3Q9UJK0 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.54■□□□□ 0.88
TSR3Q9UJK0 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TSR3Q9UJK0 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.54■□□□□ 0.88
TSR3Q9UJK0 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TSR3Q9UJK0 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TSR3Q9UJK0 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms