Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.67■□□□□ 0.9
SPASTQ9UBP0 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.66■□□□□ 0.9
SPASTQ9UBP0 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SPASTQ9UBP0 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SPASTQ9UBP0 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SPASTQ9UBP0 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SPASTQ9UBP0 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SPASTQ9UBP0 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SPASTQ9UBP0 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SPASTQ9UBP0 MIR4758-201ENST00000577688 71 ntBASIC20.66■□□□□ 0.9
SPASTQ9UBP0 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SPASTQ9UBP0 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC20.66■□□□□ 0.9
SPASTQ9UBP0 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SPASTQ9UBP0 MKRN4P-201ENST00000444706 1521 ntBASIC20.66■□□□□ 0.9
SPASTQ9UBP0 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.66■□□□□ 0.9
SPASTQ9UBP0 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SPASTQ9UBP0 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.66■□□□□ 0.9
SPASTQ9UBP0 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SPASTQ9UBP0 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.66■□□□□ 0.9
SPASTQ9UBP0 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SPASTQ9UBP0 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SPASTQ9UBP0 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SPASTQ9UBP0 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.66■□□□□ 0.9
SPASTQ9UBP0 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SPASTQ9UBP0 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
SPASTQ9UBP0 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.65■□□□□ 0.9
SPASTQ9UBP0 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
SPASTQ9UBP0 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
SPASTQ9UBP0 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SPASTQ9UBP0 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SPASTQ9UBP0 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SPASTQ9UBP0 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
SPASTQ9UBP0 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SPASTQ9UBP0 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SPASTQ9UBP0 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.65■□□□□ 0.9
SPASTQ9UBP0 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.65■□□□□ 0.9
SPASTQ9UBP0 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.65■□□□□ 0.9
SPASTQ9UBP0 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.65■□□□□ 0.9
SPASTQ9UBP0 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.65■□□□□ 0.9
SPASTQ9UBP0 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
SPASTQ9UBP0 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SPASTQ9UBP0 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SPASTQ9UBP0 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
SPASTQ9UBP0 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SPASTQ9UBP0 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.64■□□□□ 0.9
SPASTQ9UBP0 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SPASTQ9UBP0 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SPASTQ9UBP0 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.64■□□□□ 0.89
SPASTQ9UBP0 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
SPASTQ9UBP0 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SPASTQ9UBP0 AL512625.2-201ENST00000417533 625 ntBASIC20.64■□□□□ 0.89
SPASTQ9UBP0 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SPASTQ9UBP0 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.64■□□□□ 0.89
SPASTQ9UBP0 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.64■□□□□ 0.89
SPASTQ9UBP0 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SPASTQ9UBP0 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.64■□□□□ 0.89
SPASTQ9UBP0 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SPASTQ9UBP0 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
SPASTQ9UBP0 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.64■□□□□ 0.89
SPASTQ9UBP0 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SPASTQ9UBP0 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SPASTQ9UBP0 RBM17P2-201ENST00000616397 1405 ntBASIC20.63■□□□□ 0.89
SPASTQ9UBP0 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.63■□□□□ 0.89
SPASTQ9UBP0 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.63■□□□□ 0.89
SPASTQ9UBP0 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
SPASTQ9UBP0 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SPASTQ9UBP0 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
SPASTQ9UBP0 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SPASTQ9UBP0 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC20.63■□□□□ 0.89
SPASTQ9UBP0 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
SPASTQ9UBP0 AC003102.1-202ENST00000563394 1796 ntBASIC20.63■□□□□ 0.89
SPASTQ9UBP0 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.63■□□□□ 0.89
SPASTQ9UBP0 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SPASTQ9UBP0 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SPASTQ9UBP0 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SPASTQ9UBP0 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SPASTQ9UBP0 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
SPASTQ9UBP0 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SPASTQ9UBP0 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
SPASTQ9UBP0 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
SPASTQ9UBP0 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SPASTQ9UBP0 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
SPASTQ9UBP0 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
SPASTQ9UBP0 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SPASTQ9UBP0 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.62■□□□□ 0.89
SPASTQ9UBP0 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SPASTQ9UBP0 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SPASTQ9UBP0 MIPEPP3-201ENST00000412105 444 ntBASIC20.62■□□□□ 0.89
SPASTQ9UBP0 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.62■□□□□ 0.89
SPASTQ9UBP0 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.62■□□□□ 0.89
SPASTQ9UBP0 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.62■□□□□ 0.89
SPASTQ9UBP0 AL591742.1-201ENST00000604433 565 ntBASIC20.62■□□□□ 0.89
SPASTQ9UBP0 AC243732.1-201ENST00000612648 864 ntBASIC20.62■□□□□ 0.89
SPASTQ9UBP0 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.62■□□□□ 0.89
SPASTQ9UBP0 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.62■□□□□ 0.89
SPASTQ9UBP0 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.62■□□□□ 0.89
SPASTQ9UBP0 TMEM191A-211ENST00000637163 1067 ntBASIC20.62■□□□□ 0.89
SPASTQ9UBP0 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.62■□□□□ 0.89
SPASTQ9UBP0 AC061975.6-201ENST00000579045 1553 ntBASIC20.62■□□□□ 0.89
SPASTQ9UBP0 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms