Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
DNMT3BQ9UBC3 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
DNMT3BQ9UBC3 VMO1-204ENST00000441199 741 ntTSL 2 BASIC21.79■■□□□ 1.08
DNMT3BQ9UBC3 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
DNMT3BQ9UBC3 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC21.79■■□□□ 1.08
DNMT3BQ9UBC3 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
DNMT3BQ9UBC3 AP006294.2-201ENST00000641667 209 ntBASIC21.79■■□□□ 1.08
DNMT3BQ9UBC3 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
DNMT3BQ9UBC3 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
DNMT3BQ9UBC3 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
DNMT3BQ9UBC3 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
DNMT3BQ9UBC3 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
DNMT3BQ9UBC3 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC21.79■■□□□ 1.08
DNMT3BQ9UBC3 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
DNMT3BQ9UBC3 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
DNMT3BQ9UBC3 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
DNMT3BQ9UBC3 GUSBP5-202ENST00000510805 1989 ntBASIC21.78■■□□□ 1.08
DNMT3BQ9UBC3 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
DNMT3BQ9UBC3 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC21.78■■□□□ 1.08
DNMT3BQ9UBC3 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC21.78■■□□□ 1.08
DNMT3BQ9UBC3 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC21.78■■□□□ 1.08
DNMT3BQ9UBC3 AC073648.6-201ENST00000641589 218 ntBASIC21.78■■□□□ 1.08
DNMT3BQ9UBC3 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
DNMT3BQ9UBC3 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
DNMT3BQ9UBC3 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
DNMT3BQ9UBC3 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
DNMT3BQ9UBC3 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
DNMT3BQ9UBC3 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.77■■□□□ 1.08
DNMT3BQ9UBC3 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
DNMT3BQ9UBC3 MCRIP2P1-201ENST00000394346 511 ntBASIC21.77■■□□□ 1.08
DNMT3BQ9UBC3 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC21.77■■□□□ 1.08
DNMT3BQ9UBC3 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC21.77■■□□□ 1.08
DNMT3BQ9UBC3 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC21.77■■□□□ 1.08
DNMT3BQ9UBC3 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC21.77■■□□□ 1.08
DNMT3BQ9UBC3 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC21.77■■□□□ 1.08
DNMT3BQ9UBC3 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.77■■□□□ 1.08
DNMT3BQ9UBC3 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
DNMT3BQ9UBC3 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
DNMT3BQ9UBC3 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
DNMT3BQ9UBC3 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
DNMT3BQ9UBC3 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.77■■□□□ 1.07
DNMT3BQ9UBC3 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
DNMT3BQ9UBC3 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
DNMT3BQ9UBC3 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
DNMT3BQ9UBC3 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
DNMT3BQ9UBC3 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
DNMT3BQ9UBC3 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
DNMT3BQ9UBC3 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
DNMT3BQ9UBC3 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC21.76■■□□□ 1.07
DNMT3BQ9UBC3 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
DNMT3BQ9UBC3 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
DNMT3BQ9UBC3 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
DNMT3BQ9UBC3 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC21.76■■□□□ 1.07
DNMT3BQ9UBC3 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC21.76■■□□□ 1.07
DNMT3BQ9UBC3 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21.76■■□□□ 1.07
DNMT3BQ9UBC3 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.76■■□□□ 1.07
DNMT3BQ9UBC3 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
DNMT3BQ9UBC3 AC008403.3-201ENST00000598924 454 ntBASIC21.76■■□□□ 1.07
DNMT3BQ9UBC3 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
DNMT3BQ9UBC3 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
DNMT3BQ9UBC3 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.76■■□□□ 1.07
DNMT3BQ9UBC3 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC21.76■■□□□ 1.07
DNMT3BQ9UBC3 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
DNMT3BQ9UBC3 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
DNMT3BQ9UBC3 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
DNMT3BQ9UBC3 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21.75■■□□□ 1.07
DNMT3BQ9UBC3 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
DNMT3BQ9UBC3 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
DNMT3BQ9UBC3 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
DNMT3BQ9UBC3 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
DNMT3BQ9UBC3 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC21.75■■□□□ 1.07
DNMT3BQ9UBC3 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC21.75■■□□□ 1.07
DNMT3BQ9UBC3 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC21.75■■□□□ 1.07
DNMT3BQ9UBC3 AL589743.5-201ENST00000616611 1050 ntBASIC21.75■■□□□ 1.07
DNMT3BQ9UBC3 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC21.75■■□□□ 1.07
DNMT3BQ9UBC3 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.75■■□□□ 1.07
DNMT3BQ9UBC3 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.75■■□□□ 1.07
DNMT3BQ9UBC3 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
DNMT3BQ9UBC3 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
DNMT3BQ9UBC3 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
DNMT3BQ9UBC3 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
DNMT3BQ9UBC3 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
DNMT3BQ9UBC3 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.74■■□□□ 1.07
DNMT3BQ9UBC3 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
DNMT3BQ9UBC3 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
DNMT3BQ9UBC3 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
DNMT3BQ9UBC3 SAPCD2P1-201ENST00000395413 1184 ntBASIC21.74■■□□□ 1.07
DNMT3BQ9UBC3 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC21.74■■□□□ 1.07
DNMT3BQ9UBC3 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
DNMT3BQ9UBC3 AC060766.5-201ENST00000590539 871 ntBASIC21.74■■□□□ 1.07
DNMT3BQ9UBC3 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
DNMT3BQ9UBC3 HLA-B-256ENST00000639848 1089 ntBASIC21.74■■□□□ 1.07
DNMT3BQ9UBC3 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
DNMT3BQ9UBC3 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
DNMT3BQ9UBC3 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.74■■□□□ 1.07
DNMT3BQ9UBC3 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
DNMT3BQ9UBC3 ECEL1P1-201ENST00000373592 1742 ntBASIC21.73■■□□□ 1.07
DNMT3BQ9UBC3 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
DNMT3BQ9UBC3 KRT18P68-201ENST00000392293 1000 ntBASIC21.73■■□□□ 1.07
DNMT3BQ9UBC3 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms