Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
HACD3Q9P035 ANKRD20A6P-201ENST00000618763 204 ntBASIC21■□□□□ 0.95
HACD3Q9P035 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21■□□□□ 0.95
HACD3Q9P035 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
HACD3Q9P035 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21■□□□□ 0.95
HACD3Q9P035 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HACD3Q9P035 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
HACD3Q9P035 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
HACD3Q9P035 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
HACD3Q9P035 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
HACD3Q9P035 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
HACD3Q9P035 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
HACD3Q9P035 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
HACD3Q9P035 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC20.99■□□□□ 0.95
HACD3Q9P035 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.99■□□□□ 0.95
HACD3Q9P035 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC20.99■□□□□ 0.95
HACD3Q9P035 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HACD3Q9P035 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
HACD3Q9P035 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.99■□□□□ 0.95
HACD3Q9P035 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HACD3Q9P035 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.99■□□□□ 0.95
HACD3Q9P035 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
HACD3Q9P035 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
HACD3Q9P035 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
HACD3Q9P035 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HACD3Q9P035 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.98■□□□□ 0.95
HACD3Q9P035 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HACD3Q9P035 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
HACD3Q9P035 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HACD3Q9P035 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HACD3Q9P035 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC20.98■□□□□ 0.95
HACD3Q9P035 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC20.98■□□□□ 0.95
HACD3Q9P035 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC20.98■□□□□ 0.95
HACD3Q9P035 SLC7A5P1-201ENST00000568957 537 ntBASIC20.98■□□□□ 0.95
HACD3Q9P035 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
HACD3Q9P035 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HACD3Q9P035 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.98■□□□□ 0.95
HACD3Q9P035 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.98■□□□□ 0.95
HACD3Q9P035 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.98■□□□□ 0.95
HACD3Q9P035 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.97■□□□□ 0.95
HACD3Q9P035 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
HACD3Q9P035 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HACD3Q9P035 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
HACD3Q9P035 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.97■□□□□ 0.95
HACD3Q9P035 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
HACD3Q9P035 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HACD3Q9P035 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.97■□□□□ 0.95
HACD3Q9P035 AL162430.1-201ENST00000480705 870 ntBASIC20.97■□□□□ 0.95
HACD3Q9P035 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
HACD3Q9P035 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.97■□□□□ 0.95
HACD3Q9P035 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
HACD3Q9P035 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.97■□□□□ 0.95
HACD3Q9P035 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HACD3Q9P035 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HACD3Q9P035 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HACD3Q9P035 GXYLT1P2-201ENST00000433312 1230 ntBASIC20.96■□□□□ 0.95
HACD3Q9P035 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.96■□□□□ 0.95
HACD3Q9P035 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
HACD3Q9P035 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
HACD3Q9P035 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HACD3Q9P035 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
HACD3Q9P035 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HACD3Q9P035 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.95■□□□□ 0.95
HACD3Q9P035 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HACD3Q9P035 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.95■□□□□ 0.94
HACD3Q9P035 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HACD3Q9P035 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HACD3Q9P035 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HACD3Q9P035 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HACD3Q9P035 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
HACD3Q9P035 SLC7A5P2-201ENST00000553010 536 ntBASIC20.95■□□□□ 0.94
HACD3Q9P035 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HACD3Q9P035 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
HACD3Q9P035 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.95■□□□□ 0.94
HACD3Q9P035 AL049796.1-201ENST00000565336 1766 ntBASIC20.95■□□□□ 0.94
HACD3Q9P035 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
HACD3Q9P035 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HACD3Q9P035 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HACD3Q9P035 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
HACD3Q9P035 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.94■□□□□ 0.94
HACD3Q9P035 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.94■□□□□ 0.94
HACD3Q9P035 KRT18P11-201ENST00000435214 1283 ntBASIC20.94■□□□□ 0.94
HACD3Q9P035 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HACD3Q9P035 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.94■□□□□ 0.94
HACD3Q9P035 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HACD3Q9P035 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
HACD3Q9P035 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HACD3Q9P035 SLC25A24-204ENST00000569674 2357 ntBASIC20.94■□□□□ 0.94
HACD3Q9P035 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HACD3Q9P035 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.94■□□□□ 0.94
HACD3Q9P035 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
HACD3Q9P035 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
HACD3Q9P035 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HACD3Q9P035 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
HACD3Q9P035 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HACD3Q9P035 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
HACD3Q9P035 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HACD3Q9P035 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
HACD3Q9P035 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC20.93■□□□□ 0.94
HACD3Q9P035 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms