Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NCKIPSDQ9NZQ3 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
NCKIPSDQ9NZQ3 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.97■□□□□ 0.95
NCKIPSDQ9NZQ3 MIR663A-201ENST00000385250 93 ntBASIC20.97■□□□□ 0.95
NCKIPSDQ9NZQ3 GPX1P1-201ENST00000388829 606 ntBASIC20.97■□□□□ 0.95
NCKIPSDQ9NZQ3 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.97■□□□□ 0.95
NCKIPSDQ9NZQ3 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NCKIPSDQ9NZQ3 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.97■□□□□ 0.95
NCKIPSDQ9NZQ3 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.97■□□□□ 0.95
NCKIPSDQ9NZQ3 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.97■□□□□ 0.95
NCKIPSDQ9NZQ3 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.97■□□□□ 0.95
NCKIPSDQ9NZQ3 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
NCKIPSDQ9NZQ3 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.97■□□□□ 0.95
NCKIPSDQ9NZQ3 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NCKIPSDQ9NZQ3 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.97■□□□□ 0.95
NCKIPSDQ9NZQ3 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NCKIPSDQ9NZQ3 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
NCKIPSDQ9NZQ3 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.97■□□□□ 0.95
NCKIPSDQ9NZQ3 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
NCKIPSDQ9NZQ3 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NCKIPSDQ9NZQ3 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NCKIPSDQ9NZQ3 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NCKIPSDQ9NZQ3 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NCKIPSDQ9NZQ3 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.97■□□□□ 0.95
NCKIPSDQ9NZQ3 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.97■□□□□ 0.95
NCKIPSDQ9NZQ3 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.97■□□□□ 0.95
NCKIPSDQ9NZQ3 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NCKIPSDQ9NZQ3 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
NCKIPSDQ9NZQ3 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
NCKIPSDQ9NZQ3 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NCKIPSDQ9NZQ3 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
NCKIPSDQ9NZQ3 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
NCKIPSDQ9NZQ3 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
NCKIPSDQ9NZQ3 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
NCKIPSDQ9NZQ3 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NCKIPSDQ9NZQ3 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NCKIPSDQ9NZQ3 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.96■□□□□ 0.95
NCKIPSDQ9NZQ3 MFSD11-216ENST00000590393 1141 ntBASIC20.96■□□□□ 0.95
NCKIPSDQ9NZQ3 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
NCKIPSDQ9NZQ3 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
NCKIPSDQ9NZQ3 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.96■□□□□ 0.95
NCKIPSDQ9NZQ3 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
NCKIPSDQ9NZQ3 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NCKIPSDQ9NZQ3 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
NCKIPSDQ9NZQ3 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.95■□□□□ 0.95
NCKIPSDQ9NZQ3 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NCKIPSDQ9NZQ3 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NCKIPSDQ9NZQ3 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
NCKIPSDQ9NZQ3 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
NCKIPSDQ9NZQ3 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
NCKIPSDQ9NZQ3 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NCKIPSDQ9NZQ3 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.95■□□□□ 0.94
NCKIPSDQ9NZQ3 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
NCKIPSDQ9NZQ3 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
NCKIPSDQ9NZQ3 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
NCKIPSDQ9NZQ3 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.95■□□□□ 0.94
NCKIPSDQ9NZQ3 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NCKIPSDQ9NZQ3 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
NCKIPSDQ9NZQ3 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NCKIPSDQ9NZQ3 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.95■□□□□ 0.94
NCKIPSDQ9NZQ3 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NCKIPSDQ9NZQ3 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
NCKIPSDQ9NZQ3 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
NCKIPSDQ9NZQ3 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NCKIPSDQ9NZQ3 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
NCKIPSDQ9NZQ3 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.94■□□□□ 0.94
NCKIPSDQ9NZQ3 AL355802.2-201ENST00000402069 882 ntBASIC20.94■□□□□ 0.94
NCKIPSDQ9NZQ3 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.94■□□□□ 0.94
NCKIPSDQ9NZQ3 AL034346.1-201ENST00000568244 1277 ntBASIC20.94■□□□□ 0.94
NCKIPSDQ9NZQ3 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.94■□□□□ 0.94
NCKIPSDQ9NZQ3 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
NCKIPSDQ9NZQ3 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NCKIPSDQ9NZQ3 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.94■□□□□ 0.94
NCKIPSDQ9NZQ3 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NCKIPSDQ9NZQ3 AL121603.2-201ENST00000557373 2117 ntBASIC20.93■□□□□ 0.94
NCKIPSDQ9NZQ3 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
NCKIPSDQ9NZQ3 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
NCKIPSDQ9NZQ3 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NCKIPSDQ9NZQ3 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
NCKIPSDQ9NZQ3 AC007322.1-201ENST00000426983 750 ntBASIC20.93■□□□□ 0.94
NCKIPSDQ9NZQ3 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
NCKIPSDQ9NZQ3 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.93■□□□□ 0.94
NCKIPSDQ9NZQ3 AP001160.3-201ENST00000601484 763 ntBASIC20.93■□□□□ 0.94
NCKIPSDQ9NZQ3 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.93■□□□□ 0.94
NCKIPSDQ9NZQ3 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
NCKIPSDQ9NZQ3 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
NCKIPSDQ9NZQ3 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
NCKIPSDQ9NZQ3 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.93■□□□□ 0.94
NCKIPSDQ9NZQ3 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
NCKIPSDQ9NZQ3 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
NCKIPSDQ9NZQ3 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NCKIPSDQ9NZQ3 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NCKIPSDQ9NZQ3 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
NCKIPSDQ9NZQ3 AL121832.2-201ENST00000610979 668 ntBASIC20.92■□□□□ 0.94
NCKIPSDQ9NZQ3 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.92■□□□□ 0.94
NCKIPSDQ9NZQ3 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NCKIPSDQ9NZQ3 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
NCKIPSDQ9NZQ3 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NCKIPSDQ9NZQ3 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NCKIPSDQ9NZQ3 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms