Protein–RNA interactions for Protein: Q9NZ94

NLGN3, Neuroligin-3, humanhuman

Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLGN3Q9NZ94 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
NLGN3Q9NZ94 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.37■□□□□ 0.85
NLGN3Q9NZ94 AC127496.7-201ENST00000625110 1798 ntBASIC20.37■□□□□ 0.85
NLGN3Q9NZ94 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NLGN3Q9NZ94 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
NLGN3Q9NZ94 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.37■□□□□ 0.85
NLGN3Q9NZ94 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.37■□□□□ 0.85
NLGN3Q9NZ94 AC091799.1-201ENST00000422823 811 ntBASIC20.37■□□□□ 0.85
NLGN3Q9NZ94 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.37■□□□□ 0.85
NLGN3Q9NZ94 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC20.37■□□□□ 0.85
NLGN3Q9NZ94 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.37■□□□□ 0.85
NLGN3Q9NZ94 CDV3P1-201ENST00000471403 739 ntBASIC20.37■□□□□ 0.85
NLGN3Q9NZ94 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.37■□□□□ 0.85
NLGN3Q9NZ94 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NLGN3Q9NZ94 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.37■□□□□ 0.85
NLGN3Q9NZ94 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.37■□□□□ 0.85
NLGN3Q9NZ94 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
NLGN3Q9NZ94 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NLGN3Q9NZ94 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
NLGN3Q9NZ94 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
NLGN3Q9NZ94 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.37■□□□□ 0.85
NLGN3Q9NZ94 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
NLGN3Q9NZ94 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NLGN3Q9NZ94 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NLGN3Q9NZ94 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NLGN3Q9NZ94 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NLGN3Q9NZ94 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NLGN3Q9NZ94 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
NLGN3Q9NZ94 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC20.36■□□□□ 0.85
NLGN3Q9NZ94 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.36■□□□□ 0.85
NLGN3Q9NZ94 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.36■□□□□ 0.85
NLGN3Q9NZ94 AC100791.3-201ENST00000617619 330 ntBASIC20.36■□□□□ 0.85
NLGN3Q9NZ94 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.36■□□□□ 0.85
NLGN3Q9NZ94 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
NLGN3Q9NZ94 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
NLGN3Q9NZ94 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.36■□□□□ 0.85
NLGN3Q9NZ94 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
NLGN3Q9NZ94 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NLGN3Q9NZ94 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
NLGN3Q9NZ94 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.35■□□□□ 0.85
NLGN3Q9NZ94 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
NLGN3Q9NZ94 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NLGN3Q9NZ94 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
NLGN3Q9NZ94 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.35■□□□□ 0.85
NLGN3Q9NZ94 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NLGN3Q9NZ94 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NLGN3Q9NZ94 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NLGN3Q9NZ94 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.35■□□□□ 0.85
NLGN3Q9NZ94 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NLGN3Q9NZ94 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.35■□□□□ 0.85
NLGN3Q9NZ94 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.35■□□□□ 0.85
NLGN3Q9NZ94 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.35■□□□□ 0.85
NLGN3Q9NZ94 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
NLGN3Q9NZ94 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NLGN3Q9NZ94 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.35■□□□□ 0.85
NLGN3Q9NZ94 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
NLGN3Q9NZ94 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
NLGN3Q9NZ94 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NLGN3Q9NZ94 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
NLGN3Q9NZ94 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.35■□□□□ 0.85
NLGN3Q9NZ94 AC242852.2-201ENST00000615738 1807 ntBASIC20.34■□□□□ 0.85
NLGN3Q9NZ94 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NLGN3Q9NZ94 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
NLGN3Q9NZ94 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NLGN3Q9NZ94 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NLGN3Q9NZ94 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NLGN3Q9NZ94 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NLGN3Q9NZ94 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.34■□□□□ 0.85
NLGN3Q9NZ94 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.34■□□□□ 0.85
NLGN3Q9NZ94 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.34■□□□□ 0.85
NLGN3Q9NZ94 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.34■□□□□ 0.85
NLGN3Q9NZ94 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NLGN3Q9NZ94 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.34■□□□□ 0.85
NLGN3Q9NZ94 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
NLGN3Q9NZ94 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.34■□□□□ 0.85
NLGN3Q9NZ94 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NLGN3Q9NZ94 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.34■□□□□ 0.85
NLGN3Q9NZ94 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NLGN3Q9NZ94 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
NLGN3Q9NZ94 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
NLGN3Q9NZ94 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NLGN3Q9NZ94 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.33■□□□□ 0.85
NLGN3Q9NZ94 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NLGN3Q9NZ94 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
NLGN3Q9NZ94 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.33■□□□□ 0.85
NLGN3Q9NZ94 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
NLGN3Q9NZ94 AC098590.1-201ENST00000468126 897 ntBASIC20.33■□□□□ 0.85
NLGN3Q9NZ94 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.33■□□□□ 0.85
NLGN3Q9NZ94 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
NLGN3Q9NZ94 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC20.33■□□□□ 0.85
NLGN3Q9NZ94 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
NLGN3Q9NZ94 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.33■□□□□ 0.85
NLGN3Q9NZ94 AC006058.3-201ENST00000606217 1069 ntBASIC20.33■□□□□ 0.85
NLGN3Q9NZ94 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
NLGN3Q9NZ94 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
NLGN3Q9NZ94 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
NLGN3Q9NZ94 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.32■□□□□ 0.84
NLGN3Q9NZ94 LINC00565-201ENST00000562710 2331 ntBASIC20.32■□□□□ 0.84
NLGN3Q9NZ94 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
NLGN3Q9NZ94 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms